Gene Ppro_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1622 
Symbol 
ID4571932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp1737294 
End bp1739621 
Gene Length2328 bp 
Protein Length775 aa 
Translation table11 
GC content61% 
IMG OID639755666 
Productputative PAS/PAC sensor protein 
Protein accessionYP_901295 
Protein GI118580045 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2202] FOG: PAS/PAC domain
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0914545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGCC CCCTCCACCG TTGGCCCCTT CTCGAAGCCG CCCCATCCCC CCCCTCTCCT 
TCCCTGCATC AATCGCCAGG ACAACGGGCA GGCGCCCTGA TACTCCTTGT GGCCGTCATC
ATGATGATCG CCCTGCCCTG CGCCGCCTCG GCACAGGAGA CTCAGCACAG GCAGGTGCTG
GTGCTGCACT CGTACCACAA GGGCTTCAAA TGGACCGACG ACATCAGCCA GGGCATAGCA
TCCAGCCTGA ACGAACAGGG GATCAAGACC AGGATCCACT ACGAGTATAT GGATACCAAG
CGAGTGTCCG GTCCCCGCTA TACCGGGTTG CTGCGCGAGA CCTACCGCCT GAAATTCAGC
GCCATGAAAT TCCGGGTGAT CATCGCATCG GACAACGACG CCTTCGACTT TCTGCTCTCC
TACCGCGACG ACCTGTTTCC CGGAACGCCG GTGGTATTCT GCGGGGTCAA TGACTTCGAG
CCGTCCCAAT TGCACGGCAC GCGGCTCTTC ACCGGTGTCA ACGAGTCGGC CGACCTGGCA
GCCACCTTCG ACCTGGCCCT GAGACTCCAC CCCTCGGTCA GGAGAATTGT CGTCATCAAC
GACACCACGA CCACCGGTCG CATCATGCAT CGCAAGATCG TATCCCTGAT CCCCTCCCTC
CGCAGACGCG TGGAGCTGAC CTTTCTGGAA GCCGTGACCA TCCCCGAGAT CAGGGAAGAA
TTGGCAAAGC TTGAGAGCGA CAGCCTGGTG TTCTTTACCC TCTTCTTTCA GGACAGCAAA
GGACGGTTTC TGGAGTATGA CGAGGCCATC TCGCTGCTCG CGCCCCTTTG CCCAGTCCCC
ATCTACGGAG TATGGGATTT CTACCTGGGC AACGGCATCG TGGGGGGCAT GCTGACCAGC
GGCTTTTCCC AGGGGAAGGC AGCCGCAAGA ATCGCGGGGC GCATCCTGGA GGGTGAAGCT
CCCCAGCGCA TCCCGGTGGT GATGAAGAGC CCCAACAGCT TCATGTTCGA CTACCAGCAA
CTGTCCAGGT TCCACATTCC CCGATCCGCC CTGCCGAAGG GCAGCATTAT CATCAACAGT
CCCGCCTCCC GCTACTCCGT GCCGCGCAGC GTCTTCTGGG GTGCGGTTGC CGCCCTGGTC
GGTTCGGCCC TGATCATCCT GTTTCTGACC TACAACACCA TACGACGCAT GAGGGCCGAG
GAACGCAGCC GGCGCCTGGC GGCAATCGTC GACTCATCCG ATGACGCAAT CATCGGCAAG
ACGCCGGACG GCGTCATTAC CAGCTGGAAC AGGGGCGCCG CGAACAAGTT CGGCTATGGA
GAGGAAGAGA TGCTCGGCAA GTCAGTCACC CTTCTGGTTC CTCCCGAACA GCGGGACAAC
GTGCTTCGCG TCCACGAGAA GATCCGCCGC GGCGAGCATG TGGAACATTT TGAAACCGTA
CACATGAGAA AGAATGGCGA ACGAATCCAC ATGTCCCTCA CCTTCTCGCC GGTGACCGAC
AGCCAGGGGC GGGTCATCGC CGTCTCCACC ATCGGGCGCG ACATCTCCGA GCGTAAGAGA
GCCGAACAGC TGCTGCTGGA AAACGCTCTG ATCAATAGGG AACTGGAAAT TGCCCAGCAG
ATCCAGCAGT CCTTTCTGCA GGAGTGTCCC CAGGAACTAC CCGGACTGCT CATGGCATGC
CGCTGCGAAC CAGCCGCCAA GGTGGGGGGT GACTACTACG ACCTGTTCAC CCCCCGGGAG
GGGCTGGTGG ATTGCGTCAT CGCCGACATC ACCGGCCACA GCGTCGGTTC GGCCCTGCTG
ATGACAGAAA CCCGCAGCGT CCTCCAGGCC GAGGTAACCC CCGGACGCAC ACCGGGACAA
CTGCTGGCCG AGGTGAACAA CCTGCTGTAC AACGACCTGT CACGTGCGGA GATGCAGTTG
AGTATGTTCT ATGCGCGCAT CGACACGCCC AACCAGAGGC TCTCCTACGC CAACGCGGGA
CACTGCCGTC CGCTCCTGTA CCATTCCCGT GGCAAATCGG TGCAGGAACT TGATGCCGAC
GGCCTGATCC TGGGAATCAG GCGGGGTGTC TGCTTTGAAG AAGCCAGCAT CGAGGTGGAA
GCAGGGGATG TGCTGCTACT GTACACGGAC GGTGTCATTG AAGCGGAACG AGATCGGGGA
GAGTTCTTCG GCAGCGACCG ACTGAGCCGA CTGCTCACGG AGCAGCATGA ACGGCATCCG
CGGGAGATTA TCGATAAAAT CCTGGCCGAG GTGACCCGTT TTACCAGGAC CAGGGTACGA
GCCGATGACA TCGCCCTGTT CGTGGTCACA TTCACCCCGG ATGCCTGA
 
Protein sequence
MPRPLHRWPL LEAAPSPPSP SLHQSPGQRA GALILLVAVI MMIALPCAAS AQETQHRQVL 
VLHSYHKGFK WTDDISQGIA SSLNEQGIKT RIHYEYMDTK RVSGPRYTGL LRETYRLKFS
AMKFRVIIAS DNDAFDFLLS YRDDLFPGTP VVFCGVNDFE PSQLHGTRLF TGVNESADLA
ATFDLALRLH PSVRRIVVIN DTTTTGRIMH RKIVSLIPSL RRRVELTFLE AVTIPEIREE
LAKLESDSLV FFTLFFQDSK GRFLEYDEAI SLLAPLCPVP IYGVWDFYLG NGIVGGMLTS
GFSQGKAAAR IAGRILEGEA PQRIPVVMKS PNSFMFDYQQ LSRFHIPRSA LPKGSIIINS
PASRYSVPRS VFWGAVAALV GSALIILFLT YNTIRRMRAE ERSRRLAAIV DSSDDAIIGK
TPDGVITSWN RGAANKFGYG EEEMLGKSVT LLVPPEQRDN VLRVHEKIRR GEHVEHFETV
HMRKNGERIH MSLTFSPVTD SQGRVIAVST IGRDISERKR AEQLLLENAL INRELEIAQQ
IQQSFLQECP QELPGLLMAC RCEPAAKVGG DYYDLFTPRE GLVDCVIADI TGHSVGSALL
MTETRSVLQA EVTPGRTPGQ LLAEVNNLLY NDLSRAEMQL SMFYARIDTP NQRLSYANAG
HCRPLLYHSR GKSVQELDAD GLILGIRRGV CFEEASIEVE AGDVLLLYTD GVIEAERDRG
EFFGSDRLSR LLTEQHERHP REIIDKILAE VTRFTRTRVR ADDIALFVVT FTPDA