| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1612 |
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| Symbol | |
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| ID | 4571922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 1727247 |
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| End bp | 1728479 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639755656 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_901285 |
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| Protein GI | 118580035 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0416985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAAAAA GATCGGACAA GTTCTTCCTC GGGCGCCAGC CCATCCTGAA TCGCCATCAG
GAGATCATCG GTTTCGAGCT GCTTTTCAGG TCCACCGATT TTAATGCAGC CAGTTTCACC
AACTACTCCC ACGCCAGCGC CAGTGTCATC AGCAACGTCA TGTCCAGCTT CGGCATCGAG
GAGGTTTTGG GGGGAAAGCT CGGCTTCATC AATGTCAACC TCGAAGTGCT CTTCTCCGAA
TTCATCGAAC TGCTCCCCAT CGGCCAGACG GTCATCGAAC TGCTGGAGAT CATCGATCTG
AACGAACATG TGGTGGAACG TTGCCGGGAA CTGAGAAAGC TCGGTTTCCA GCTGGCGTTG
GACGATCATG AGTACAGCGA GGAGCATGAC GAGATCTACA AGGTCATTCA TATCGTCAAG
ATCGATATCC TGCAGAGCGA TATGAGCAAA CTGCCTGAGA TCGTGCGCAC CTTCCGCCGC
CGTCGCATAC GGGTGCTGGC TGAGAAGGTG GAGACGGTGG AGCAGTTCGA GGCCTGTTTC
AGGATGGGCT TCGACTATTT CCAGGGCTAC TTCTTCGAGC GGCCGGTGAT CCTCAACAGA
AAGCGCATCG ACGTGTCGGC CATGGCCATG ATGAAGCTTC TGCAGCAGTT GATCATGGAT
GCCTCGCTGT CGGAGCTGGA ACAGACCTTC AAGGAGAACC CCGGCCTTTC CTACAACCTA
CTGCGTCTGG TCAATTCCGT GGGCATTGGC CTGCGCAACA AGATCAAGAA CCTGCGTCAT
GCCATCGTGC TCCTGGGACT CAACCAGCTC AGACGCTGGG CTCAACTGTC GTTGTTCGCC
ATCAACGACA GCCGCGGTCT GAACCACCCC CTGCTGGAGA TGGCGGTGGT GCGGGGGCAT
ATGATGGAAC ATCTGACTGA CGGTAAACGC TCCCAGGACG AATACGGTGA GGCCGCCTTC
ATGACCGGCA TCCTGTCGCT TTTGGATGTG CTCTTCGAAA CTCCCATGGA GGAGATCGTG
GAGGGGCTGC ATCTGAGCGA CGACGTGAGC GCGGCGCTGC TCTCCCGTCA GGGGAAGCTG
GGCATGCTGC TGGCCCTGGC GGAGAAGGTG GAAACCACCG ATTTCGATGC CGTCATCCCC
ATGTTGGATG AGTGCAATGT CACCATGACT CAGCTGCTGG CGGCCCAGAT GGAGGCCTTT
GGCTGGCGGG CGGGGGTGAT CGCGCAGAAG TAG
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| Protein sequence | MEKRSDKFFL GRQPILNRHQ EIIGFELLFR STDFNAASFT NYSHASASVI SNVMSSFGIE
EVLGGKLGFI NVNLEVLFSE FIELLPIGQT VIELLEIIDL NEHVVERCRE LRKLGFQLAL
DDHEYSEEHD EIYKVIHIVK IDILQSDMSK LPEIVRTFRR RRIRVLAEKV ETVEQFEACF
RMGFDYFQGY FFERPVILNR KRIDVSAMAM MKLLQQLIMD ASLSELEQTF KENPGLSYNL
LRLVNSVGIG LRNKIKNLRH AIVLLGLNQL RRWAQLSLFA INDSRGLNHP LLEMAVVRGH
MMEHLTDGKR SQDEYGEAAF MTGILSLLDV LFETPMEEIV EGLHLSDDVS AALLSRQGKL
GMLLALAEKV ETTDFDAVIP MLDECNVTMT QLLAAQMEAF GWRAGVIAQK
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