| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1466 |
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| Symbol | |
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| ID | 4571865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 1566554 |
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| End bp | 1566934 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639755511 |
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| Product | biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_901140 |
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| Protein GI | 118579890 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02804] TonB system transport protein ExbD, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0559794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGAAA AGGAATTTGA CTACATCAAC ATCATCCCGT TCGTGGACAT CATGCTGGTG
CTCCTGACCA TCGTGCTGAC CACCTCCACC TTCATCGCCA GCGGCGGCAT CCCGGTCAAT
CTCCCCAAGG CCTCGCGCAG CAATCAGGAG GTCATCAAGA CCAGGACCAT CCAGGTGGAC
GTGAACGGTA CCGTCATCTT CGACGGCCAT ATCCTGACCA TGCCTGCGCT GGCTACGGTC
TTGCGGCCGC TTGACCGGGC CACCCCCTTC CTGATCAGGG CCGACCGGGA CATCTCCCTG
CAGGGATTCG TGGATGTGCT GGACACGGTC AAGAGCTGCG GTTTCAGCCG GGTCAGCCTA
CAGACCGAGA GTCGGCAATG A
|
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| Protein sequence | MEEKEFDYIN IIPFVDIMLV LLTIVLTTST FIASGGIPVN LPKASRSNQE VIKTRTIQVD
VNGTVIFDGH ILTMPALATV LRPLDRATPF LIRADRDISL QGFVDVLDTV KSCGFSRVSL
QTESRQ
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