Gene Ppro_1314 details

Gene Information

• Locus tag: Ppro_1314
• Symbol: smpB
• ID: 4572362
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 1386415
• End bp: 1386873
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 639755358
• Product: SsrA-binding protein
• Protein accession: YP_900992
• Protein GI: 118579742
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.00672101
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTGAAA AACTGATCTG TAATAACAAA AAGGCCTACC ACGACTATTT CATCGAGGAA 
AAGATGGAGG CCGGTCTTGT CCTGCTGGGA ACCGAGGTGA AGTCCTTGCG GGCTGGCAAA 
GCCAACCTGA ACGACTCCTT CATGCTGGTG CGCGATGGCG AAGCCTTTCT GCATAATCTG 
CACATCTCTC CCTACGAGTT CGGCAATCGC CAGAACCATC AGGCCGATCG CAATAGAAAA 
CTGCTCTTGC ACCGCAAGCA GATTGATCGT TTGTACGGCA GAATCAGGGA ACAGGGCTAT 
TCGATCGTTC CCCTGCGCAT GTATTTCAAG GACGGTCTGG TGAAGGTCGA GATAGGGCTT 
GCCAAAGGCA AGAAACTATA CGATAAACGT GAAGACATGA AGAAGAAGGA CAGTCAGCGC 
GAACTGTCCC AGGCGCTCAA ATCGAAAAAC AGGGAGTAA 

 

Protein sequence

MGEKLICNNK KAYHDYFIEE KMEAGLVLLG TEVKSLRAGK ANLNDSFMLV RDGEAFLHNL 
HISPYEFGNR QNHQADRNRK LLLHRKQIDR LYGRIREQGY SIVPLRMYFK DGLVKVEIGL 
AKGKKLYDKR EDMKKKDSQR ELSQALKSKN RE