| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1284 |
|---|
| Symbol | |
|---|
| ID | 4573778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 1345793 |
|---|
| End bp | 1347964 |
|---|
| Gene Length | 2172 bp |
|---|
| Protein Length | 723 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639755324 |
|---|
| Product | methylmalonyl-CoA mutase |
|---|
| Protein accession | YP_900963 |
|---|
| Protein GI | 118579713 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
|---|
| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.811968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCAT TCCCGAATTT CAAGGATATT GCCTACGAAC CGCACAGGAA GGTCGTGGAC
ACACAGACCT GGCAGAAGGA GTTCACAGAG TCCGTCGGAG AACCGCCGAT CTGGATGACC
AACGAGCAGA TCCCGGTCAA GGCGCTCTAC ACCGAGGAGG ACATCAAGGG CATCGAGCAC
ATCGGATCCA CCGCCGGTAT CGCCCCCAAC CTGCGTGGCC CCTACCCCAC CATGTACGTG
CAGCGCCCCT GGACGATCCG CCAGTACGCC GGTTTCTCCA CCGCCGAGGA GAGCAACGCC
TTCTACCGCC GCAACCTGGC CATGGGGCAG AAAGGGCTCT CGGTGGCCTT CGACCTGGCC
ACCCACCGCG GCTATGACTC GGACCATCCC CGGGTGGTGG GAGATGTGGG CAAGGCCGGG
GTTGCCGTCG ACTCCATCCT GGACGCCGAG ATCCTCTTTT CCGGCATCCC GCTGAACAAG
ATGTCCGTCT CCATGACCAT GAACGGCGCG GTCCTGCCGG TTCTGGCCTT CTACATCGTG
GCCGGTCTGG AGCAGGGGGC GCAGCTGGAC GAGCTGTCCG GCACGATCCA GAACGACATC
CTCAAGGAGT TCATGGTGCG CAACACCTAC ATCTATGGGC CGGAAGGCTC CATGCGCATC
ATCGGCGACA TCTTTGAGTA CACATCCAAA TACATGCCCA AGTTCAACAG CATAAGCATC
TCCGGCTATC ACATGCAGGA AGCCGGCGCC ACCGCCGACA TCGAGCTGGC CTACACCATC
GCCGACGGCC TGGAATACAT CCGCACCGGC ATCACCGCCG GCCTGGAGGT GGACAAATTC
GCGCCGCGTC TCTCCTTCTT CTGGGCCGAG GGGATGAACT ACTTCATGGA GGTCTCCAAA
CTGCGTGCCG GTCGACTTTT GTGGGCCAAA CTGCTCAAGC AATTCAACCC GAAGAATCCA
AAATCCCTGG CCCTGCGCAC CCATTCTCAG ACCTCGGGGT GGAGCCTCAC GGAACAGGAT
CCCTTTAACA ACGTCACCCG CACCTGCCTG GAGGCAATGG CAGCCACCCT GGGGCACACC
CAGTCGCTGC ACACCAACGC CCTGGACGAG GCCATCGCCC TGCCCACCGA CTTCTCGGCC
CGCATCGCCC GCAACACCCA GATTTACCTG CAGAGCGAAA CTTCCATCTG CAAGGCAATC
GACCCCTGGG GCGGCTCCTA CTACGTGGAA TGGCTGACCG ACCAGCTGCG CAAGAAGGCC
TGGGCGCACA TCGTGGAGGT GGAGTCCCTG GGAGGCATGG CCAAGGCCAT TGAGACTGGC
CTGCCCAAGA TGCGCATCGA AGAGGCGGCG GCCCGCAAAC AGGCCAGGAT CGACTCCAAG
GCCGAGCCGA TCATCGGCGT CAACAAGTTC CGGCTGGAGC AGGAGGATCC CATCGACATC
CTCTCCATCG ACAACACTGC CGTACGCGAA TCCCAGATCG CCCGACTGAA GAAGCTGCGC
GCCGAACGGG ACAACGCCAA GGTCCAGGGA ATCCTGGAGG CCATAACCAG GGCGGCCGAA
TCCCGGGAGA ACGGCAACCT GCTGGAGCTG GCGGTGGAGG CTGCCAAGGC GCGGGCCAGC
CTGGGCGAGA TATCCGACGC CATGGAGAAA GTCTATCCCC GCCACAAGGC GGTCATCCGC
TCCATCTCCG GAATCTACAG CTCCGAGTAC GCTGAAAACG AAGAGGTGCA GGAGGTACAG
CGCATGTGCG CCGAGTTCGA GGAGCAGGAG GGGCGGCGGC CCCGCATCCT GGTGGCCAAG
ATGGGACAGG ACGGCCACGA CCGGGGCGCC AAGGTCATCG CCACCGCCTT CTCCGACCTG
GGGTTTGATG TGGATGTGGG TCCGCTGTTC CAGACTCCGG AAGAGACGGC CGACATGGCG
GTGGAGAACG ACGTGCACGT GGTCGGCTTC AGCTCATTGG CAGCCGGGCA CAAGACCCTG
CTTCCCCAGC TGGTGGAGGA GCTCAGGAAG CGGGGACGGG GCGATATCCT GGTGCAGATC
GGCGGCGTCA TCCCGGCCCA GGACTACCAG TACCTGTACG ACCACGGCGC CGACCTGATC
TTCGGACCCG GCACGGTCAT CCCCATCGCG GCCAGGAAGA CCCTGGAGCT GCTCAAGAAA
CGACTGGCAT GA
|
|---|
| Protein sequence | MSSFPNFKDI AYEPHRKVVD TQTWQKEFTE SVGEPPIWMT NEQIPVKALY TEEDIKGIEH
IGSTAGIAPN LRGPYPTMYV QRPWTIRQYA GFSTAEESNA FYRRNLAMGQ KGLSVAFDLA
THRGYDSDHP RVVGDVGKAG VAVDSILDAE ILFSGIPLNK MSVSMTMNGA VLPVLAFYIV
AGLEQGAQLD ELSGTIQNDI LKEFMVRNTY IYGPEGSMRI IGDIFEYTSK YMPKFNSISI
SGYHMQEAGA TADIELAYTI ADGLEYIRTG ITAGLEVDKF APRLSFFWAE GMNYFMEVSK
LRAGRLLWAK LLKQFNPKNP KSLALRTHSQ TSGWSLTEQD PFNNVTRTCL EAMAATLGHT
QSLHTNALDE AIALPTDFSA RIARNTQIYL QSETSICKAI DPWGGSYYVE WLTDQLRKKA
WAHIVEVESL GGMAKAIETG LPKMRIEEAA ARKQARIDSK AEPIIGVNKF RLEQEDPIDI
LSIDNTAVRE SQIARLKKLR AERDNAKVQG ILEAITRAAE SRENGNLLEL AVEAAKARAS
LGEISDAMEK VYPRHKAVIR SISGIYSSEY AENEEVQEVQ RMCAEFEEQE GRRPRILVAK
MGQDGHDRGA KVIATAFSDL GFDVDVGPLF QTPEETADMA VENDVHVVGF SSLAAGHKTL
LPQLVEELRK RGRGDILVQI GGVIPAQDYQ YLYDHGADLI FGPGTVIPIA ARKTLELLKK
RLA
|
|---|
| |