| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1228 |
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| Symbol | |
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| ID | 4574114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 1281295 |
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| End bp | 1283166 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639755268 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_900907 |
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| Protein GI | 118579657 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0002097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATATCC GTCTGATCCC CGGCATCTCC CTGCTGACCC TGTCGCTGCT GAGCGGCACA
TCCCTGGGCG CGGAAACAGC CAAAGAAGAA CCCTACAGCC TGGGCGAAGT TGTCGTCACC
TCGGAACGAC TGAAAGAGTA CATCACAAAC CATCCGCTTG ATGTGACGAC GGTGGAGCGC
GGGGAGATCG TAAGCCGCAA CCTGGGGAGC GTGGAGGAGA TCCTCAAGAC CATGCCAGGG
GTGGAGGTCT ATTCCAGCGC CGGGGTCGGC TCGCGCATCT CCATCAGAGG TTCGGGCCGC
TCCGGCAGCG TGATGGTTCT CCTGAACGGC AGGCCGCTCA ACTCAAACCA GTACGGCAGC
CAGGACTTGA GCGCCATCCC GGTGGACAGC ATCCAGTCGG TTTCGGTCTT CAAGCCGCCG
GTTCCGGTCT GGCTCGGTCC GGGGGGGAGC GACGGCGCCA TCAACATCAT CACCCGAACG
CCGAAACAGG GGGGGGGCAA GGAGAAACAG CGCAGTTCGC TTAAGGGGGG TGGAGGCTCC
TACGGTCTGG TGGAGGGAAG TGTAAGCCAC CAACTGCCGG TTTCCGACAG TACCGTCCTG
CTCGCAGCCA CCGGAAACCA CCGTGACGGC AAACGCACCA ACAGCGACCG CAACGACGGC
GCCTTCAACC TGAACTGGAA TCGCCAGGGA GACGAGGGGC GTCGCTACGA GTTCAACGGC
CGCTACTACC AGGCCGAATT CGGCTCGCCC GGACCGGTGG ACAACGAGAC CCCCCATGCA
CGCCAGGAGT ACCGCAAGGG TTCCCTGGAC GCTCGCTACT CCGGCCTGCT GGGGCAATCG
GGAACCGTCA GCGCCACCGC CTACGGCGAC ATGATCTATC TGAAAGACAC TGACCAGTCC
GGCTCCCGCT ACACCCTGAA CGACAACAAG GCCGGCCTCA AGCTGGACAC CACCTGGTCG
GATGAATCTG AAAACTGGGA CCTGCGTCTG GGCGGGATGA CCGAGTGGAA CGGCTATGAC
CATACCCTGA GCGGAGAGCA CGAGCGCTTC AGGAACGGCC TCAGCGTGCA GTACGACCGC
AGATTCGGCC CATTGACAAC CACCTTCGGC CTGCGGGGGG ACCTGACCAA CGACTTCGGC
GCTAACCCGG GGGGAACCAT CGGGCTGGGT TGGGGCATTG CGGACAAGAC GCTGCTCAAG
CTGCGGGCCG GCTACACGGT GAACATCCCC CTGTTCGGAC AGCTCTACCA GACCAGCCAC
GGCTCCATCG ACCAGACACG GGGCAATCCG GACCTGAAAA AGGAGCGGGT CTGGTCCTAT
GAAATAGGGC TGGAACACAC CTTCGCCAAG GACCGGTTGC TGCAGCTGAC CCTGTTCAGG
AGCGACACCG TCGACCTGAT CAGTTCCCGC CGGGGGAGCG ATATGATCTA TCGGCCGGTG
AACATACGGG GCGCCGAACG CCAAGGGGGC GAGATCATGG CCACGTACGC CTGGGACAAC
GGCCCGACCC TGGAAGCCAG CCTGACCATC CAGGACTCGG CGGTCAAGAG CACCGGCAAG
AAGCTCCCCT ACACGCCCGG CCTGAAGATG AAATACACAC TCTCCTACAC CCTCCCCCGC
CTGGCCACCA GACTGGAGAC CACGGTCCGC TACGAAGGGA GCCGTTACAG TCAGGCGGAG
AACAAGAGCT ACCAGCGGAT GGACGACGCC GTTCTGGTGG ACCTGAAGGC GACCCAACCG
TTCAAGATCG GAAAAATAGC CACAGAAATC TATCTGAGGG TTGATAATCT CTTCGATACG
GCGTATGAAA CTCATCTGGG GCATCCCGAT GACGGCATCC GTGCCGCCGC CGGCATACAG
ATGAGATTCT AG
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| Protein sequence | MHIRLIPGIS LLTLSLLSGT SLGAETAKEE PYSLGEVVVT SERLKEYITN HPLDVTTVER
GEIVSRNLGS VEEILKTMPG VEVYSSAGVG SRISIRGSGR SGSVMVLLNG RPLNSNQYGS
QDLSAIPVDS IQSVSVFKPP VPVWLGPGGS DGAINIITRT PKQGGGKEKQ RSSLKGGGGS
YGLVEGSVSH QLPVSDSTVL LAATGNHRDG KRTNSDRNDG AFNLNWNRQG DEGRRYEFNG
RYYQAEFGSP GPVDNETPHA RQEYRKGSLD ARYSGLLGQS GTVSATAYGD MIYLKDTDQS
GSRYTLNDNK AGLKLDTTWS DESENWDLRL GGMTEWNGYD HTLSGEHERF RNGLSVQYDR
RFGPLTTTFG LRGDLTNDFG ANPGGTIGLG WGIADKTLLK LRAGYTVNIP LFGQLYQTSH
GSIDQTRGNP DLKKERVWSY EIGLEHTFAK DRLLQLTLFR SDTVDLISSR RGSDMIYRPV
NIRGAERQGG EIMATYAWDN GPTLEASLTI QDSAVKSTGK KLPYTPGLKM KYTLSYTLPR
LATRLETTVR YEGSRYSQAE NKSYQRMDDA VLVDLKATQP FKIGKIATEI YLRVDNLFDT
AYETHLGHPD DGIRAAAGIQ MRF
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