Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1191 |
Symbol | |
ID | 4574662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 1242841 |
End bp | 1244715 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639755232 |
Product | 1-deoxy-D-xylulose-5-phosphate synthase |
Protein accession | YP_900871 |
Protein GI | 118579621 |
COG category | [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism |
COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCAGT ATTTGAACCA TATAGATTCA CCCGATGATT TGAAGAAGCT GAAGCCGGAG CATCTGCTGG ATCTGGCGGC CGAGGTGCGC CGCTTCCTGC TGGAGAAGGT CTCTGTCACC GGCGGCCATC TGGGGTCCAA CCTGGGCACG GTGGAACTCT CCATCGCGCT GCTGTACTGC TTCGACTCGC CCAACGACAA GATCATCTGG GACGTGGGGC ACCAGGCCTA TACCCACAAG ATCCTCACCG GCAGGAGGGA CCGCTTCCAC ACCCAGCGCC AGTACAAGGG GCTCTCCGGT TTTCCCAAGC GCTCCGAGTC CGAGCATGAC GCTTTCGGGG TGGGGCACTC ATCCACCTCC ATCTCCGCGG CCTTGGGGAT GGCGGCGGCG GCCGATCTGG CTGGCGCGAA AAACCACGCC ATCGCCGTCA TCGGTGACGG ATCCCTGACC GGTGGCATGG CCTTCGAGGC GCTGAACCAG GCCGGCCATC TCAAGAAGGA CCTGATCGTT ATCTTGAACG ACAACGAGAT GTCCATCTCC AAAAACGTGG GGGCCTTTTC TTCGTTCATC TCCCGCAAGA TGACCGGCAG ATACTTCCGC GACCTGAAGA AGGAGATGCA GGGGCTTTTG CGCAACATTC CGGCCATCGG CTCCGACATC CTGCACTTTG CCCGGCGGGC CGAGAATTCG CTGAAGAGCT TCCTGACGCC GGGGTCGCTG TTCGAAGCGT TGGGTTTCGA CTATCTGGGG CCGCTGGATG GTCACGACCT GCCCCAGCTG ATCGAGGTGT TCAACAACAT CAACCAGCTG GACGGTCCGC TGCTGGTGCA TGTCATGACC ACCAAGGGCA AGGGGTACAA GCCGGCCGAG GAAAACCCGG ACAAGTTCCA CGGCGTGGGG CCCTTCGACA TCGTCACCGG CAAGGCGACG TCCTCTACCT CGGCCAGGAG CTACACGGAG CTGTTTGGCG AGGCCATGGT GGATCTGGCA GAGCAGGATC CCCGGGTCGT GGCCATTACC GCCGCCATGC GCGACGGCAC CGGGTTGAAG ACCTTCTCCG AGCGCTTTCC CAAACGCTTC TTCGACGTGG GGATCGCCGA ACAGCACGCC ATGACCTTCG CCGCCGGCCT GGCAGCCGAC GGTTTCCGTC CGGTAACCGC CATCTATTCC ACCTTCGTAC AGCGCGCCTA TGACCAGGTC TTTCACGACA TCTGTCTGCA GAAGCTGCCG GTGACCATCG CCATGGACCG CGCCGGCCTG GTGGGGGACG ACGGCCCGAC CCACCATGGA GTGATGGACT ACTCCTTTCT GCGCCACATC CCCGGACTGG CCCTGATGGC GCCCAAGGAC GAGAACGAGC TTCGCCACAT GCTCAAGACC GCCGTCACGA GCGGCGTTCC CATCTCCCTG CGCTATCCGC GCGGCGCGGG TATGGGGGTG GAGCTGGACA GGGATCTGAA GACCCTGGAT ATCGGCAGGG GAGAGCTTTT GATGGAGGGG AGCGACATCT GCCTGATTGC CATCGGCTCC ACGGTCTATC CGGCGCTCCA GGCCGCCCAT TCCCTGCAAG GGCTGGGGGT GCGGGTTGGG GTGGTCAATG CCCGTTTCAT CAAGCCGCTG GATGCCGAGT TGATCCTCTC CGTTGCCGGT TCGTGCGGCC GGATCATGAC CGTGGAGGAG AACCTGCTGC AGGGAGGATT CGGCAGCGCG GTCCTGGAAC TGCTCAACGA CAACAACATG CAGGATGTGA TCGTCAGGCG CCTCGGCATA CCCGACCGTT TCGTGGAGCA TGGCTCCCAG GCGCGGCTGC GCCAGGATCT GGGCATCGAT GCCGAGGGGA TCGCCGCGGC TGCCCTGGCG TTTCTCAAAC AGTAG
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Protein sequence | MYQYLNHIDS PDDLKKLKPE HLLDLAAEVR RFLLEKVSVT GGHLGSNLGT VELSIALLYC FDSPNDKIIW DVGHQAYTHK ILTGRRDRFH TQRQYKGLSG FPKRSESEHD AFGVGHSSTS ISAALGMAAA ADLAGAKNHA IAVIGDGSLT GGMAFEALNQ AGHLKKDLIV ILNDNEMSIS KNVGAFSSFI SRKMTGRYFR DLKKEMQGLL RNIPAIGSDI LHFARRAENS LKSFLTPGSL FEALGFDYLG PLDGHDLPQL IEVFNNINQL DGPLLVHVMT TKGKGYKPAE ENPDKFHGVG PFDIVTGKAT SSTSARSYTE LFGEAMVDLA EQDPRVVAIT AAMRDGTGLK TFSERFPKRF FDVGIAEQHA MTFAAGLAAD GFRPVTAIYS TFVQRAYDQV FHDICLQKLP VTIAMDRAGL VGDDGPTHHG VMDYSFLRHI PGLALMAPKD ENELRHMLKT AVTSGVPISL RYPRGAGMGV ELDRDLKTLD IGRGELLMEG SDICLIAIGS TVYPALQAAH SLQGLGVRVG VVNARFIKPL DAELILSVAG SCGRIMTVEE NLLQGGFGSA VLELLNDNNM QDVIVRRLGI PDRFVEHGSQ ARLRQDLGID AEGIAAAALA FLKQ
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