Gene Ppro_1052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1052 
Symbol 
ID4575155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand- 
Start bp1102809 
End bp1103420 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content65% 
IMG OID639755091 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_900735 
Protein GI118579485 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGCG TGCAGTTTCT GCTCACCTCC CTCGTCGTGG TACTCATCCC GGGTACCGGC 
GTCATCTACA CCGTTTCCAC CGGCATCACC CGGGGACGAA GAGCCGCTCT GTACGCCTCC 
CTCGGCTGCA CCGCCGGGAT CGTCCCCCAC CTGCTGGCAA CCATCCTCGG CCTGACAGCC 
CTCATGCATA CCAGCGCCCT GGCCTTCCAG ACCCTCAGGT ACGCCGGGGT CGCCTATCTC 
TTGTACATCG CCTGGGCCAC CTGGAAGGAC CGGTCGGCAT TCGCCCTGGA CGACGCCCCG 
CGACAAAACT CCGCCCTATC CCTGGTGTTC AGGGGAGTGC TGCTGAACAT CCTCAACCCC 
AAGCTGACGA TCTTCTTCCT CGCCTTCCTC CCCCAGTTCG TCACCCCCGT CGCCAGCCCC 
CTGCCCCAGC TGCTGCTCCT GAGCGGCGTG TTCATGGCCA TGACCTTCGC GGTGTTCGTG 
GTCTATGGGC TCCTCGCCCA TCAGTTCCGC GGGGTGGTGA TCGAGTCGGC ACGGGTCCAG 
GCCTGGCTGC GCCGGAGCTT TGCCGCCGCC TTCGCCGGCC TGGGACTCCA CCTGGCTTTT 
TCCGAGAGAT AA
 
Protein sequence
MISVQFLLTS LVVVLIPGTG VIYTVSTGIT RGRRAALYAS LGCTAGIVPH LLATILGLTA 
LMHTSALAFQ TLRYAGVAYL LYIAWATWKD RSAFALDDAP RQNSALSLVF RGVLLNILNP 
KLTIFFLAFL PQFVTPVASP LPQLLLLSGV FMAMTFAVFV VYGLLAHQFR GVVIESARVQ 
AWLRRSFAAA FAGLGLHLAF SER