| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1030 |
|---|
| Symbol | |
|---|
| ID | 4572770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 1080403 |
|---|
| End bp | 1081818 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639755070 |
|---|
| Product | dihydrolipoamide dehydrogenase |
|---|
| Protein accession | YP_900714 |
|---|
| Protein GI | 118579464 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.578679 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAG AGGTATTTGA TCTTGTGGTG CTCGGAGCGG GACCGGGGGG CTATGTGGCC
GCCATCCGCG CTTCCCAGCT GGGGATGAAG GTTGCCGTGG TGGAACCGCG GCCGACCATG
GGGGGCGCCT GCCTGAACGA GGGGTGTATC CCCAGCAAGG CGCTGCTGGA TTCCAGCGAG
CATTTCTCCA TGGCCCGCGA CAAGTTCGCC AGCCACGGCG TTATCGTCAA CCCGCCGAAA
CTGGACGTCG CCGTCATGCA GGCCCGCAAG GCCGATGTGG TCAAGAAACT CACCGACGGC
GTCGCCTACC TGTTCAAGAA GAACAAGGTC CAGGTGATCT GCGGCACGGG CAGGATCGTT
CGTCCCGTAG CAGGAGAGCC CCACTGCGTG GAGGTGACGG CCACGGGTGC CACCCAGACC
GTCAAGGCCA GGAAAGTGCT GCTGGCAACG GGAGGGGTGC CGGTGGAGGT GCCCACGCTC
CCCTTTGACG GCACGCTGAT CGTCAGTTCC AAGGATGCCC TGGAGTTCTG TAGCGTACCG
GAACACCTGA TCGTGGTGGG CGCCGGTTAT ATCGGCCTGG AGTTGGGGTC GGTTTGGAGG
CGCCTGGGGG CCAGGGTCAC GGTTGTGGAG ATGATGCCCA AGATGCTCCC CTTCACCGAC
AGCGAGGTCA CGGACGCCCT GATGAAGATC CTGAAAAAAC AGGGAGTGGA ATTCCGCATG
GCTACCAGCG TCACCAAGGT GGAGAAGGTC GGCGACAAGG CGCGGGTAAG CCTGACCGCC
GGCGGCAAGA CCGAGCTGGT GGAGTGCGAC AAGATCCTGG TGGCCATCGG CAGGAAACCG
GTCACGGCCG GGCTGGGTCT GGAAGACGCC GGCGTTGCGG TCAACGACAA GGGGCGCGTC
GAGGTGGACG AAAACTACGA AACATCCGTG GCCGGTATCT ACGCCATCGG TGACCTGATC
CCGGGACCGC TGCTTGCCCA CAAGGCATCG GAAGAGGCGG TGGCCTTTGC CGAACGCCTG
ACCGGTATGA AATCCCAGGT CCACTACGAA ACCATTCCGG GCATCGCCTA TACCTGGCCT
GAGGCTGCCT CGGTGGGCAA GACCGAGCAG GCCCTGAAAG AGGAGCAGAT CCCCTACGCC
GTGGGCAAAT TCAACTTCAT GGGCAATGGC CGGGCTCGGG CCATGGATGA AACCGAGGGT
TTCGTCAAGA TCCTGGCCCA CAAGGAGAAC GATAAGGTTC TCGGCATCCA CATCGTCGGG
CCCCGGGCCT CGGACATGAT CGCGGAAGGG GTGGCTGTCA TGGTCTACGG CGGCACCTCC
CACGACATCG CGGCCATGTT CCACGCCCAT CCCACCCTGG CCGAAGCAAT CAAGGAAGCT
GCGCTTGACG TGCATAAATC AGCCATTCAT GCCTGA
|
|---|
| Protein sequence | MSEEVFDLVV LGAGPGGYVA AIRASQLGMK VAVVEPRPTM GGACLNEGCI PSKALLDSSE
HFSMARDKFA SHGVIVNPPK LDVAVMQARK ADVVKKLTDG VAYLFKKNKV QVICGTGRIV
RPVAGEPHCV EVTATGATQT VKARKVLLAT GGVPVEVPTL PFDGTLIVSS KDALEFCSVP
EHLIVVGAGY IGLELGSVWR RLGARVTVVE MMPKMLPFTD SEVTDALMKI LKKQGVEFRM
ATSVTKVEKV GDKARVSLTA GGKTELVECD KILVAIGRKP VTAGLGLEDA GVAVNDKGRV
EVDENYETSV AGIYAIGDLI PGPLLAHKAS EEAVAFAERL TGMKSQVHYE TIPGIAYTWP
EAASVGKTEQ ALKEEQIPYA VGKFNFMGNG RARAMDETEG FVKILAHKEN DKVLGIHIVG
PRASDMIAEG VAVMVYGGTS HDIAAMFHAH PTLAEAIKEA ALDVHKSAIH A
|
|---|
| |