| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1026 |
|---|
| Symbol | |
|---|
| ID | 4572852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 1075772 |
|---|
| End bp | 1077124 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639755066 |
|---|
| Product | dehydrogenase catalytic domain-containing protein |
|---|
| Protein accession | YP_900710 |
|---|
| Protein GI | 118579460 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.138637 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAAAT GGGGGCTGAC CATGGAAGAG GGCACCCTGG CCAAGTGGCT GATCGACGAG
GGAAGCCAGA TCGAACCGGG GATGGCTATT GCCGAGGTGG AGACCGACAA GATCGTCAAC
GTGATGGAGG CGAACCAGAG CGGTGTCCTG GCCAAGCAGA TAGCCGATGA AGGCGATGTG
CTGCCGGTGG GCGCGCTGAT TGGCGTTATC ACCCAAGGGG ATGCCGCGGA AAGTGCCATC
GCCGATTTTA TCGCCAATTT CGGCTCTGAT GAGGAAGCAG CGCCAGCGGA AGAGTCTGCC
TGCAGCGCAG CATCCGATGA CATCTACTGC CTGACCATGC CCAAGTGGGG GCTGACCATG
GAAGAGGGGA CCCTGGTCAA GTGGTTGATC GATGAGGGAA CCCAGATCGA GCTGGGCATG
TCCATCGCCG AGGTGGAGAC CGACAAGATC GTCAACGTGC TCGAAGCCAC CCACGCCGGT
ATCCTGAGAC GCAAGATCGC CGATGAAGGG GACGAACTCC CTGTTGGCGC TCTGCTGGGA
GTGATCGCCG ATGCGTCTGT TTCCGACCAG GCCATTGACG CCTTCCTCGC CGGCGGGGCA
ACGGAGACGG CAGCGGAAGA TGCCTCGGTG CCGGCAGCCG AGGAACCGCA GGCTGAATCG
GCAGCAGCGG GACAGATCCT GGACGGCTCG CTGCCGCTGG AGGGGATGCG CGCGGCCATA
TCCAAGACCG TGACCACCTC ATGGACGACC ATCCCGCACT ATATGGTGAC GGTGGCCATC
GACATGGGCA GGGCGGAGGC GCTGAGCAGC GCCCAGAAAC AGGCCGGTAA GCGGGTCTCC
ATCAACGACA TGCTGATCAA GGCATCGGCC CTGGCAATCG GCAAGTACCC CCTGATCAAC
GCCGCCTTTA GCGGCAAGAA CATCACGCTG CACGGAGACG TGAACGTCGC CATGGCCATC
GGTCTGGAAG AAGGAGTGAT CATGCCGGTG ATCAGGGAAT GCCAGAAGCT CCCGGTCCAG
CAAATCGGCG AGAGGAGCCG CGAACTGGTG GCACTCGCCA AGGAGGGCAA GCTGGGCAGC
GCCGAATTGA GCGGTGGGAC CTTCGCCATA TCCAACATGG GGATGCTGGG GGTGGAGGAT
TTTATCGCCA TCGTGCCGCC CAACCTGTCC GCTATCCTGG CCGTCGGCAT GGTCAAGGAC
GAGCCGGTGG TGCGCGACGG CCAGGTGGTT GCTGCCCGCA TGATGAGGGT GACCGTTTCC
GCCGACCACC GGGTGCATGA CGGCGCCTAT GCCGCCAAAT TCCTCGGTGA ACTGAAGGGC
ATACTGGAAG CGCCGGAGAC GATCCTGGCC TGA
|
|---|
| Protein sequence | MPKWGLTMEE GTLAKWLIDE GSQIEPGMAI AEVETDKIVN VMEANQSGVL AKQIADEGDV
LPVGALIGVI TQGDAAESAI ADFIANFGSD EEAAPAEESA CSAASDDIYC LTMPKWGLTM
EEGTLVKWLI DEGTQIELGM SIAEVETDKI VNVLEATHAG ILRRKIADEG DELPVGALLG
VIADASVSDQ AIDAFLAGGA TETAAEDASV PAAEEPQAES AAAGQILDGS LPLEGMRAAI
SKTVTTSWTT IPHYMVTVAI DMGRAEALSS AQKQAGKRVS INDMLIKASA LAIGKYPLIN
AAFSGKNITL HGDVNVAMAI GLEEGVIMPV IRECQKLPVQ QIGERSRELV ALAKEGKLGS
AELSGGTFAI SNMGMLGVED FIAIVPPNLS AILAVGMVKD EPVVRDGQVV AARMMRVTVS
ADHRVHDGAY AAKFLGELKG ILEAPETILA
|
|---|
| |