Gene Ppro_0966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0966 
Symbol 
ID4574251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp1009220 
End bp1010134 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content63% 
IMG OID639755007 
ProducttRNA pseudouridine synthase B 
Protein accessionYP_900652 
Protein GI118579402 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0130] Pseudouridine synthase 
TIGRFAM ID[TIGR00431] tRNA pseudouridine 55 synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000895381 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTAGCG GCTTCTTCGT TATCGATAAA CCTGCCGGCA TCAGCTCCCA CGACGTGGTC 
AGCCGTGTGC GCAGAATCCT GGGTACACGC AGGGTGGGGC ACACCGGTAC GCTCGACCCT
TTTGCAACCG GTGTTCTGCC GGTGGCGGTC AATGACGCCA CCAAGGTGAT CCCTTTTCTG
GACGAGGGGG TCAAATGCTA CCAGGCCCTG CTGCGCCTGG GCGTGGTGAC CGATACCCTG
GACATGACCG GCAGGATTCT TGCCGAGGGA GATTACTCCT CCGTCAGCCG GGAGCGCTTC
CTTGAGCTGT TGACCCGCTT CTGTGGGGTG ATTAGCCAGG TTCCCCCCAT GTTCTCGGCA
ATCAAGCGTG ACGGTCAGCC GCTGTACAAG CTGGCCAGAC AGGGCATCGA GGTGGAGCGC
CGGGCGCGAC AGGTGGAGAT TCACTCCCTT GAGCTTTTGT CGTTTGAGCC GCCTCTGGCA
TGCCTGCGGG TCAGCTGCTC CCGCGGCACC TATGTGCGTA GCTTGGCGGA TGACCTTGGA
GCGGAGTTGG GGTGCGGAGC GTCCTTGCAG GAACTGCGCA GAATTGCCAG CGGACCGTTC
CATCTCTCCA GCGCCATTAC GCTTGCGACG CTTGAGCAGG CCAAGGAGGG AGGGATGTCG
GATGCGCTCT GTCTGGATCC CTATGCGGCC CTTGCGCATC TGCCCGACAT TCCCCTGTCC
GATGCCGGAC TGGCCAAGGT CAGGCATGGC AGGTCGCCGG AATGGGGGGA GACGCTGCTT
TCCGCTCCCT GCGAGGGGAC TGAGGCAGGG CTGGCTCGGC TCTCACGTAA CGGGAGTCTG
GCCGCCGTTG CCCGGATCGA ACCGCTGCCT TATGGTGGTT CCCGGCTGGT TCTCAAGCGG
GTATTCTGCA ATTAG
 
Protein sequence
MISGFFVIDK PAGISSHDVV SRVRRILGTR RVGHTGTLDP FATGVLPVAV NDATKVIPFL 
DEGVKCYQAL LRLGVVTDTL DMTGRILAEG DYSSVSRERF LELLTRFCGV ISQVPPMFSA
IKRDGQPLYK LARQGIEVER RARQVEIHSL ELLSFEPPLA CLRVSCSRGT YVRSLADDLG
AELGCGASLQ ELRRIASGPF HLSSAITLAT LEQAKEGGMS DALCLDPYAA LAHLPDIPLS
DAGLAKVRHG RSPEWGETLL SAPCEGTEAG LARLSRNGSL AAVARIEPLP YGGSRLVLKR
VFCN