Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0966 |
Symbol | |
ID | 4574251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 1009220 |
End bp | 1010134 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639755007 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_900652 |
Protein GI | 118579402 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000895381 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTAGCG GCTTCTTCGT TATCGATAAA CCTGCCGGCA TCAGCTCCCA CGACGTGGTC AGCCGTGTGC GCAGAATCCT GGGTACACGC AGGGTGGGGC ACACCGGTAC GCTCGACCCT TTTGCAACCG GTGTTCTGCC GGTGGCGGTC AATGACGCCA CCAAGGTGAT CCCTTTTCTG GACGAGGGGG TCAAATGCTA CCAGGCCCTG CTGCGCCTGG GCGTGGTGAC CGATACCCTG GACATGACCG GCAGGATTCT TGCCGAGGGA GATTACTCCT CCGTCAGCCG GGAGCGCTTC CTTGAGCTGT TGACCCGCTT CTGTGGGGTG ATTAGCCAGG TTCCCCCCAT GTTCTCGGCA ATCAAGCGTG ACGGTCAGCC GCTGTACAAG CTGGCCAGAC AGGGCATCGA GGTGGAGCGC CGGGCGCGAC AGGTGGAGAT TCACTCCCTT GAGCTTTTGT CGTTTGAGCC GCCTCTGGCA TGCCTGCGGG TCAGCTGCTC CCGCGGCACC TATGTGCGTA GCTTGGCGGA TGACCTTGGA GCGGAGTTGG GGTGCGGAGC GTCCTTGCAG GAACTGCGCA GAATTGCCAG CGGACCGTTC CATCTCTCCA GCGCCATTAC GCTTGCGACG CTTGAGCAGG CCAAGGAGGG AGGGATGTCG GATGCGCTCT GTCTGGATCC CTATGCGGCC CTTGCGCATC TGCCCGACAT TCCCCTGTCC GATGCCGGAC TGGCCAAGGT CAGGCATGGC AGGTCGCCGG AATGGGGGGA GACGCTGCTT TCCGCTCCCT GCGAGGGGAC TGAGGCAGGG CTGGCTCGGC TCTCACGTAA CGGGAGTCTG GCCGCCGTTG CCCGGATCGA ACCGCTGCCT TATGGTGGTT CCCGGCTGGT TCTCAAGCGG GTATTCTGCA ATTAG
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Protein sequence | MISGFFVIDK PAGISSHDVV SRVRRILGTR RVGHTGTLDP FATGVLPVAV NDATKVIPFL DEGVKCYQAL LRLGVVTDTL DMTGRILAEG DYSSVSRERF LELLTRFCGV ISQVPPMFSA IKRDGQPLYK LARQGIEVER RARQVEIHSL ELLSFEPPLA CLRVSCSRGT YVRSLADDLG AELGCGASLQ ELRRIASGPF HLSSAITLAT LEQAKEGGMS DALCLDPYAA LAHLPDIPLS DAGLAKVRHG RSPEWGETLL SAPCEGTEAG LARLSRNGSL AAVARIEPLP YGGSRLVLKR VFCN
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