Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0686 |
Symbol | rpsC |
ID | 4571891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 725748 |
End bp | 726380 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639754729 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_900375 |
Protein GI | 118579125 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.15256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGACAAA AAGTTAATCC GATAGGTTTC AGACTTGGAG TAATTAAATC ATGGGACTCC AAATGGTACG CTGAGGCTGA TTATGCAAAA CTTCTGCACG AGGATCTAAA GATTCGTGCA TTCCTTAAAA AACGTCTGTA TAGTTCCGGC ATTTCTAAGA TAGAAATTGA AAGAGCTGCG AATAAGACGA AGATAAATAT TTATACAGCT CGGCCCGGTC TGATCATCGG TAAAAAAGGT TCAGAGGTTG AAACGATTAA GAAAGAGCTT TCAAATCTCA CCTCCAAAGA AATTTTTATA AATATTATCG AAGTTCGTAA GCCAGAGCTT GATGCCCAAT TAGTTGCTGA AAATGTAGCA TTGCAGCTTG AAAGGCGAAT CGCATTTCGC AGGGCAATGA AGAAGAGTGT TACTTCTGCT TTGAAGTTTG GCGCTAAAGG CATACGTATT ACATGCTCTG GACGGCTTGG TGGAGCTGAA ATGTCGCGTA CCGAATGGTA CCGCGAAGGG CGTGTCCCAC TGCATACTCT TCGTGCTGAT ATTGATTATG GCTGTGCCGA GGCAAAAACG ACTTATGGTC TTATTGGCAT AAAAGTACTC ATATTTAAAG GCGAAGTTCT TCCAGGTCAT TAA
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Protein sequence | MGQKVNPIGF RLGVIKSWDS KWYAEADYAK LLHEDLKIRA FLKKRLYSSG ISKIEIERAA NKTKINIYTA RPGLIIGKKG SEVETIKKEL SNLTSKEIFI NIIEVRKPEL DAQLVAENVA LQLERRIAFR RAMKKSVTSA LKFGAKGIRI TCSGRLGGAE MSRTEWYREG RVPLHTLRAD IDYGCAEAKT TYGLIGIKVL IFKGEVLPGH
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