Gene Ppro_0681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0681 
SymbolrplD 
ID4571886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand+ 
Start bp723330 
End bp723953 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content45% 
IMG OID639754724 
Product50S ribosomal protein L4 
Protein accessionYP_900370 
Protein GI118579120 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.486374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTCGA TAGCAGTCTA TAACATGAAC AGACAGCAAG TTGGTGAGTT GCAGTTAGCA 
GATGATGTCT TTAATGCAGA TGTTAAAGAA CATCTGATGC ATCTTGCACT CCGTATCCAA 
CTTGCAAATC GCCGCGCCGG AACCGTTAAA ACTAAAACGC GCTCGGAAGT GGCAGGAAGC 
GGTAAAAAAC CTTTCAAGCA GAAGGGCACG GGGAATGCTC GTCAAGGGTG TGTAAGGGCT 
CCCCAGTATC CTGGTGGCGG TGTTGCCTTT GGCCCACAGC CCAAAGAGTA TCATCTGAGT 
ATGAACAAAA AAGCGCGCAA ATCTGCGATC TGCTCTGCTC TCTCTCTTCA GTGCAAGAAT 
AATCGTATCA CTGTGATGGA TAAGCTAGAT TTTTCGTCTA TCTCAACCAA GGCTTTTGTC 
GACTTCATGA AACGCTTTGA GATAGAGCGC TCTCTTATTA TTACTGACGA TTTCAGCAAC 
AATCTTCAAC TCTCGTGTCG CAATGTTCCA CATGTGAAGC TTCTCAAGCA TGACGCACTC 
AATATCCATG ACATTCTGAA ATACAAGAAT ATCATTTTCA CACAGGGTGC CGTGCAATCC 
GTAGAAGGAG TTCTGAATAA ATGA
 
Protein sequence
MPSIAVYNMN RQQVGELQLA DDVFNADVKE HLMHLALRIQ LANRRAGTVK TKTRSEVAGS 
GKKPFKQKGT GNARQGCVRA PQYPGGGVAF GPQPKEYHLS MNKKARKSAI CSALSLQCKN 
NRITVMDKLD FSSISTKAFV DFMKRFEIER SLIITDDFSN NLQLSCRNVP HVKLLKHDAL 
NIHDILKYKN IIFTQGAVQS VEGVLNK