| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0614 |
|---|
| Symbol | |
|---|
| ID | 4572135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 650350 |
|---|
| End bp | 652062 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639754651 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_900303 |
|---|
| Protein GI | 118579053 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.69222 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC TGCTGACCAC CCTGCACGCC AAATACTCCC ACGCCTCCCT GGCGCTCCCC
TGCCTGACCG CCGCCTGTGG CGACCTGGCC GATCTGGGCA TCAGCATCAG GGAGTGGACC
GTCAACGAAC CACGCCAGCA GCTCCTGCGC CGGATCATGG CCGGACAGGC CGACGCGGTG
GCCTTTTCCT GCTACATCTG GAACATCGAG AGCAGCCTCA AGCTTGCCGA CGACATAAAG
AAGATCGCGC CCCACACCCG GATCATCCTG GGCGGGCCGG AAGCGTCCTT TGGCATCTTC
CAGCTGATGC ACGACAATCC GGCCGTGGAT TTCGTGGTCA GGGGAGAGGG GGAGGCGGTC
TTCCGCAGCC TGATGGAAAC GCTGCTCCGC CAGAGGGGCA GCGACCCGTC CAGCGAGAAG
GACCAGTTTC AGGGAATCGA AAATCTCTTC TACCGCTGGG GCAACGACAT CCTCTCCGGC
CCCCTGGCCA CGGGCTACCT GGAGATGGAT AGCATCCCCT CCCCCTTCCA GGCCGGCCTG
GTTGACCTGT CCAAACCGCT GATCTACTAC GAAACATCCC GGGGCTGCCC CTTCTCCTGC
GCCTTCTGCC TCTCCTCCCT GGAGGGGCGG GTGCGCTCAT TCTCCATGGA GCGCATCGAG
AGCGACCTTG TCTGGCTCAT GTCCCGGGAA ATCCAGCAGA TCAAGCTGGT GGATCGCACC
TTCAACTACG ACGGGGAGCG GGCCAACCGC ATCTGGGAAC TGATCCTGGC CAACAACCGG
ACCAGCCGCT TCCACTTCGA AATCGCCGCC GACCTGCTCA CCGACCGGAA CATGGAGATC
TTGCGCCGCG TTCCGCCCCG AACCTTCGGC TTCGAGATCG GCGTGCAGTC ATTCCGGGCG
GACAGCCTGG AGCAGGTGCA GCGCCGTAGC AACCTGGAAC GGTTGGCAGC CAACGTGCGC
CGACTGCGCG CGGAAACGGT GGTGGAACTG CACCTGGACC TGCTTGCCGG CCTGCCGGGG
GAAAGCTATG ACGGGCTGCT GGATTCCCTG GACCGACTGG CGGAGCTGAA ACCCCATGTC
ATCCAGATCG AGCCGCTGAA ACTGCTCAAG GGCTCGGCCA TGCGCACGAT CGCCAGGGAC
AACGGGTACC GCTTCTCCCA GTCGCCCCCC TACACCATCC TGACCACCCC CTGGCTCTCC
TTCGACGACA TCGGCCGCAT CGAAACCATC GGGCGCCTGC TGGACCTGTT TTACAACCGA
GGGGGATTCG GGACGGCTCT GGCCTTCATG CAACGGCACA TTGGGTTCAG CCAGCTGTTC
CACCTCATGG CCGGCCAGCC CGAGGGAGAC GACCTGACCG GCCGCACCAT CCGTCGCACC
TTTGAGCTGT TCGCCTCCCT GGCCGCCCCA CTGCTGCCGG AGCAGGAACG GGAACTGCTG
TACGACACGC TCTTCTTCGA CTACTGTCGG GTGGAGATGC CGCTGATGGG CAAACTCCCC
TCCTTCGCGG CTGATCGGCA GCAGCAGTGC TCGTGGCCCG GGCGGGCTGA GCTGCCGTCG
GGAATCGAGC TGCCGACCCA TGGCCGCGTA CGAGCCTTCA GGTCTTTTTT TCAGTGGGAT
TATCGAAACG AGGGATGGAA GGAGGAACCG ACGGCGGTGA CGTTCGTCTA CGCCTCCGCC
GCCGGTCAGG GATTACAGGT CAGAGTGCTG TGA
|
|---|
| Protein sequence | MKLLLTTLHA KYSHASLALP CLTAACGDLA DLGISIREWT VNEPRQQLLR RIMAGQADAV
AFSCYIWNIE SSLKLADDIK KIAPHTRIIL GGPEASFGIF QLMHDNPAVD FVVRGEGEAV
FRSLMETLLR QRGSDPSSEK DQFQGIENLF YRWGNDILSG PLATGYLEMD SIPSPFQAGL
VDLSKPLIYY ETSRGCPFSC AFCLSSLEGR VRSFSMERIE SDLVWLMSRE IQQIKLVDRT
FNYDGERANR IWELILANNR TSRFHFEIAA DLLTDRNMEI LRRVPPRTFG FEIGVQSFRA
DSLEQVQRRS NLERLAANVR RLRAETVVEL HLDLLAGLPG ESYDGLLDSL DRLAELKPHV
IQIEPLKLLK GSAMRTIARD NGYRFSQSPP YTILTTPWLS FDDIGRIETI GRLLDLFYNR
GGFGTALAFM QRHIGFSQLF HLMAGQPEGD DLTGRTIRRT FELFASLAAP LLPEQERELL
YDTLFFDYCR VEMPLMGKLP SFAADRQQQC SWPGRAELPS GIELPTHGRV RAFRSFFQWD
YRNEGWKEEP TAVTFVYASA AGQGLQVRVL
|
|---|
| |