Gene Ppro_0607 details

Gene Information

• Locus tag: Ppro_0607
• Symbol: atpC
• ID: 4572128
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 642912
• End bp: 643328
• Gene Length: 417 bp
• Protein Length: 138 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 639754644
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_900296
• Protein GI: 118579046
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.444989
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGAAA AACTGAAGCT GGAAATCATC ACTCCCTATG GAAAGGTCGT CGATGCCGAG 
GTGGACGAGG TCATGGCCAC CGGCGTGCTG GGTGAGTTCT GCGTGCTGCC GGGGCATGCC 
CCGTTTCTCT CCTCCCTGAA GATCGGCGAA TTCTGCTACA GGGTTGACGG AGTGGCGGCC 
TGCATGGCGC TCAACTGGGG CTATTTCGAA GTCCAGGACG ACAGGGTCGT CGTATTGGTG 
GAGACCGCCG AGCATGCCCA TGAGATCGAC GTGGAGCGGG CCAGGGTTGC CCAGGCCCGC 
GCGGAGCAGG CGTTGAAAGG GATCGGGCCG GAGGACAAGC AGTTCAAGAT CTACGAGGCT 
GCCCTGGAGC GCGCCCTGAT ACGCATGCAG GTGGCCGGCA GGGAAACCAG GAAATGA 

 

Protein sequence

MAEKLKLEII TPYGKVVDAE VDEVMATGVL GEFCVLPGHA PFLSSLKIGE FCYRVDGVAA 
CMALNWGYFE VQDDRVVVLV ETAEHAHEID VERARVAQAR AEQALKGIGP EDKQFKIYEA 
ALERALIRMQ VAGRETRK