| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0568 |
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| Symbol | |
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| ID | 4572471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 604213 |
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| End bp | 604962 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639754605 |
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| Product | rhomboid family protein |
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| Protein accession | YP_900257 |
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| Protein GI | 118579007 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGGTGG AACGAAACAG CACCATGATA CCGCTCCGAG ACTACCGCCC CACCCGCAGC
TTTCCGTTGA TGACGGTCAT GCTGATCGCC CTCAACATCG CGGTGTTCCT TCAGGACCGC
CTCGGCGGAC ACTACACGCT GGTGCAGGTG AATACCGGCC AGGGGATCGT CCTGGCCAGG
GAGTTCGTGG GCGGCCTCAC GAGCCACTTC TCCCTCGTGC CGAGCGATCT CGTCTCCCAC
CCCCTGCTGG CATGGCCGAC CATCTTCACC TCCATGTTCC TGCACGGAAA CTGGCTGCAC
ATCGGTTCCA ACATGCTGTT CCTGTGGGTA TTCGGCGACA ACATCGAGGA CACCCTCGGC
CGCCTGCGCT TCAGCGTCTT CTATCTCCTC TGCGGCTTGG CCGCGGCACT TGTCCAGATC
CTGAGCGACC CGGCTTCAAC CATCCCCATG GTCGGGGCCA GCGGCGCCGT GGCGGGGGTG
CTGGGCGCCT ACCTGCTGCT CTTCCCCCAC AACCGGGTCC TCACCCTGAT CCCCCTGTTC
ATCTTTTTCA CCACCGTCGA GCTCCCCGCC TACCTGATTA TCGGCTACTG GGCACTGCTC
CAGTTCCTCA ACGCCTATCT CCTGAAGGGT GGAGGGATGT TGCGGGGCGG CGGAGTGGCC
TATTTCGCCC ACATCGGCGG ATTTGTGGCA GGAATTATCC TGATCATGCT TCTGAAAGGG
AGCACACGTC ACGGAACAGG GAGGAGATGA
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| Protein sequence | MPVERNSTMI PLRDYRPTRS FPLMTVMLIA LNIAVFLQDR LGGHYTLVQV NTGQGIVLAR
EFVGGLTSHF SLVPSDLVSH PLLAWPTIFT SMFLHGNWLH IGSNMLFLWV FGDNIEDTLG
RLRFSVFYLL CGLAAALVQI LSDPASTIPM VGASGAVAGV LGAYLLLFPH NRVLTLIPLF
IFFTTVELPA YLIIGYWALL QFLNAYLLKG GGMLRGGGVA YFAHIGGFVA GIILIMLLKG
STRHGTGRR
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