Gene Ppro_0556 details

Gene Information

• Locus tag: Ppro_0556
• ID: 4572459
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 592703
• End bp: 594574
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 639754593
• Product: radical SAM domain-containing protein
• Protein accession: YP_900245
• Protein GI: 118578995
• COG category: [C] Energy production and conversion
• COG ID: [COG1032] Fe-S oxidoreductase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.837617
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTCA TACCCACAAC AAGATCAGAG ATGCATAGGC GTGGCTGGGA GCAACTGGAC 
GTTATTTTCG TCAACGGCGA TGCCTATGTG GATCACCCCG CCTTCGGTGT GCCGCTCCTG 
GCCCGCTGGC TGGAGAAACA CGGCTTCCGG GTCGGCGTCA TTGCCCAGCC TGACTGGCGC 
TCAGTGGAAC CCTTCATGGC CTTGGGCAGG CCGCGGCTCT TCTTCGCCGC ATCGGCGGGA 
GCCATGGATT CCATGGTGGC CCACTACACG CCGGCACGCA AGCTGCGTCA TGACGATGCC 
TACACTCCGG GCAACCGCCA CGGTGCCCGC CCCAACCGGG CCACCCTGAT CTATACCTCC 
CGGCTGAAGG AGGCCTTCCG CGATGTGCCG GTGGTAATCG GCGGGATCGA GGCCTCGCTG 
CGACGCTTCG CCCACTACGA TTACTGGGAA AACCGTGTGC GGCGTTCGCT GCTCTTCGAC 
GCCAAGGCCG ATCTCCTGCT CTACGGCATG GCCGAACGTT CGATGCTGGA ACTGGCGCAA 
CGCATGGGGC GGGGTGAGTC TCTGGCGGAT ATACGGGGGC TGCGCGGTAC CTGCTGGGTT 
GAAAAGGCCG GTCATCATCT AACCGATCAC CTGGAGATCC CCTGCTTTGA GGAGTGCGGC 
AGCGACCGGC TGAAGTTTGC CGAGGCGTTC CGGCTGGCAA GCAGGGAACA GAACCCCTAT 
AACGGCCGGA CCATCGTCCA GCGCCATGGC GATCGCCTGC TGGTCTGCGC TCCCCCTTCT 
TTGCCGCTGG AGGAGGCGGA GATGGATAGT CTCTACGCCC TTCCTTTCGA GAAGGCTCCC 
CATCCATCCT ATGGTGAAAC GATCCCGGCC TGGGAGCAGA TCAGGTGCTC CATAACCAGT 
CATCGCGGCT GTTTCGGCGG CTGCTCTTTC TGCGCCATTG CCATGCATCA GGGGAAGCTG 
ATCCAGTCCC GCGGTCAGTC TTCCGTGGAG AGCGAGATCC GCGAACTGGT TCGCAAGCCC 
TGGTTCCGGG GCAGCATCAG CGATATCGGT GGACCCACCG CCAATATGTA CGGACTCTCC 
TGTGGCGATT CCGCAGCCAT GAAATGCTGC CGCAGGGAGA GCTGCCTCTT CCCGAAGCAG 
TGCCGGCATC TGATCGTGGA TGACCGGCGA GCCGTCCGCC TGCTGCATGC GGCCCGCGAC 
TTCGCGGGGG TACGTCATGT TGCGGTGTCG TCGGGGGTGC GCTACGATCT GCTGGAACGG 
CAGCCGGCCT ACTGCCGGGA ACTGATCGCT CACCATGTGG GGGGATTGCT CAAGGTGGCG 
CCGGAGCATC TGGTGGAACG GGTCACGATG CTGATGCGCA AACCGGGACT GGCGGTTTTC 
GAGCGTTTCC TGTCCCGCTT TCGCGAAGAG AGCAGGCGCC TCGGCAAGCC GCAGGGCATC 
GTGCCGTATC TGATTTCCGG CCACCCCGGC TGCTCCTTGG CTGATATGCT CGAACTGGCG 
CTGGCCCTGC AACGGCTCGG TCTGCGGGTC GAACAGGTGC AGGACTTCAC CCCTACTCCC 
GGCACCTGCG CTACATGCAT GTATTACAGC GGAATTGATC CTGAGACAGG GGAAAAGCTG 
TACGTGGCGA CCAGCGACCG GGAGAAGGGG CTGCAGAAAG CGCTCCTGCT CGGCCATCTG 
CCCGGGGAGC GCAAGAAGGT TCTCGAGGCT CTCGCTCTGC TGGGGCGGGA GGAGTTGGCC 
ACTGTGTTGC TGACGGCGGG CAGGTCGGAA GCGGTAAGCG CGAAGAGACC CCACTCCGTT 
GGGCAGGGAG TGATTCATCC CGGCAGGGAG AGAAAAGCTG GGCGAGGAAA AGGCACAAAA 
AAAGCCCGCT GA 

 

Protein sequence

MAFIPTTRSE MHRRGWEQLD VIFVNGDAYV DHPAFGVPLL ARWLEKHGFR VGVIAQPDWR 
SVEPFMALGR PRLFFAASAG AMDSMVAHYT PARKLRHDDA YTPGNRHGAR PNRATLIYTS 
RLKEAFRDVP VVIGGIEASL RRFAHYDYWE NRVRRSLLFD AKADLLLYGM AERSMLELAQ 
RMGRGESLAD IRGLRGTCWV EKAGHHLTDH LEIPCFEECG SDRLKFAEAF RLASREQNPY 
NGRTIVQRHG DRLLVCAPPS LPLEEAEMDS LYALPFEKAP HPSYGETIPA WEQIRCSITS 
HRGCFGGCSF CAIAMHQGKL IQSRGQSSVE SEIRELVRKP WFRGSISDIG GPTANMYGLS 
CGDSAAMKCC RRESCLFPKQ CRHLIVDDRR AVRLLHAARD FAGVRHVAVS SGVRYDLLER 
QPAYCRELIA HHVGGLLKVA PEHLVERVTM LMRKPGLAVF ERFLSRFREE SRRLGKPQGI 
VPYLISGHPG CSLADMLELA LALQRLGLRV EQVQDFTPTP GTCATCMYYS GIDPETGEKL 
YVATSDREKG LQKALLLGHL PGERKKVLEA LALLGREELA TVLLTAGRSE AVSAKRPHSV 
GQGVIHPGRE RKAGRGKGTK KAR