Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0536 |
Symbol | |
ID | 4572545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 574099 |
End bp | 575175 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639754573 |
Product | twitching motility protein |
Protein accession | YP_900225 |
Protein GI | 118578975 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGTA TTGACGCACT TTTCAGGATG ATGAAAGAGC AGGGGGCATC GGACCTGCAC CTCTCCACCG GCAATCCGCC CATTTTTCGC CTGCATGGCG AGATGGTCCG GCTCAACTTC AAATCCCTGG GGCACGACGA GCTGCACTCG ATCCTGTTCG AGATCTTGAA TGCCAAGCAG AAGGAGCAGT TCGAGACGAC CAAGGATCTG GACTTCGCCT ATGCCGTTCC GGACCTGGCG CGCTTCCGGG GCAACATCCT CATGCAGCAC CGGGGCATCG CCGCGGTGTT CCGCATCATA CCGGGCAAGG TCCTCTCCGC CGACGACCTG AACCTGCCCG ACGGGGTGCG GCGCATGACC AATTTCAAGA AGGGGCTGGT GCTGGTCACC GGCCCCACCG GCTCGGGCAA ATCCACCACC CTGGCCGCCC TGATCGACCA CATCAACTCC ACCCGCAAGG AGCATATCCT CACCCTGGAG GACCCGCTGG AGTTCATCCA CGAGAACAAG CAGTCGCTGC TCAACCAGCG CCAGATCGGC GAGCACACCC AGAGCTTCTC CGCAGCCCTC AAGGCGGCCC TGCGGGAGGA TCCGGACATC ATCCTGGTGG GGGAGATGCG CGACCTGGAG ACCATTCAGC TGGCCATGAG CGCCGCCGAG ACCGGACACC TGGTGTTCGG CACCCTGCAC ACCAACACGG CAGCCAAGAC CATCGACCGG ATCATCGACG TCTTTCCCAC CGAGCAGCAG CAGCAGGTGC GGGCCATGTT GTCCGAGTCG CTCAGGGGGG TGGTCTGCCA GCAGCTGCTC AAGACCGCCG AGGGGAAGGG GCGCGTGGCC GCCTTCGAAA TCATGCTCGG CACCCCTGCC ATCGGCAACC TGATCCGCGA GGCCAAGACC TTCCAGATCC CCTCCATCAT CCAGACCGCC AAGAAGGACG GCATGCAGCT CATGGACCAG CATCTGCTGG ACCTGCTCAA GACCAAGAAG GTCAACCCGG AAGAGGCCTG CCGCTGCGCC ATCGACAAGA AGCAGTTCGA ACAGTACCTG CCGGCTGACA GCGCCAAGGC GGACTAA
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Protein sequence | MARIDALFRM MKEQGASDLH LSTGNPPIFR LHGEMVRLNF KSLGHDELHS ILFEILNAKQ KEQFETTKDL DFAYAVPDLA RFRGNILMQH RGIAAVFRII PGKVLSADDL NLPDGVRRMT NFKKGLVLVT GPTGSGKSTT LAALIDHINS TRKEHILTLE DPLEFIHENK QSLLNQRQIG EHTQSFSAAL KAALREDPDI ILVGEMRDLE TIQLAMSAAE TGHLVFGTLH TNTAAKTIDR IIDVFPTEQQ QQVRAMLSES LRGVVCQQLL KTAEGKGRVA AFEIMLGTPA IGNLIREAKT FQIPSIIQTA KKDGMQLMDQ HLLDLLKTKK VNPEEACRCA IDKKQFEQYL PADSAKAD
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