| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0528 |
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| Symbol | |
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| ID | 4572710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 562324 |
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| End bp | 564654 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639754565 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_900217 |
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| Protein GI | 118578967 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000697651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCAGA ACCTCGTCAT CGTTGAGTCG CCCGCCAAGG CGAAGACCAT AGAGAAATTC
CTGGGAAAGG ACTACAAGGT ACTGGCCTCC TTCGGCCACG TGAGGGCCCT GCCCAGCAAG
CAGGGGTCGG TGGATATCGA ACAGGACTTC ACCCCCAAGT ACCACATCCT CCCCGAGAGC
AAGAAACATA TCGACGCCAT CAAGGCAGCC CTCAAGGACG CCAAGAACCT GCTCCTGGCA
ACCGACCCCG ACCGCGAGGG AGAGGCCATC TCCTGGCACC TGCTGGCGGC CCTGGGGCTG
GACAAGAAGA ATCCGGGCAA GTCCATCCAG CGGGTGGTCT TCCACGAGAT CACCAAAGAC
GCCATCATCC ACGCCGTGGA GAATCCCCGT GACATCGCCA CGGACCTGGT GGATGCCCAG
CAGGCGCGCT CGGTGCTGGA CTACCTGGTC GGCTTCAACC TTTCCCCCTT CCTCTGGAAG
AAGATCCGCT ACGGCCTCTC GGCCGGGCGC GTCCAGTCGG TGGCGCTGCG CCTGGTCTGC
GAGCGGGAGA AAGAGATTCA GGCCTTCAAG GAACAGGAGT ACTGGACCAT CGCCGCGCGC
CTGGGGGTAA AGCCGGGAGC GGAGTTCCGG GCCTCGCTGG TGGAGGTTGG CGGCAAAAAA
CTGGGCAAGT TCGACATCCC CGACGAGAAC GTGGCAACGG CACTGAACCG GGCACTGAAG
TCGGGGAGCT ACCGGGTGGC AAAGATCACC AGGACGGAAC GCAAGCGCAA CCCGTCGCCC
CCCTTCACCA CCTCGACCCT GCAGCAGGAA GCTTCCCGCA AGCTGGGGTT CTCGGCCAAG
AAGACCATGT CAACGGCCCA GAAACTGTAC GAGGGGATCG ACATCGGCCA GGAGGGGACC
GTCGGCCTGA TCACCTACAT GCGTACCGAC AGCGTCACCC TCTCCAGCCA GGCTTTGACC
GAGGCCCACG AGGTCATCAG CGCGGCCTAC GGAGCAGAGT ATGCCCTGGC CAAACCGCGC
ATCTTCAAGA CCAAGACCAA GAATGCCCAG GAGGCCCACG AGGCGGTGCG CCCCACCTCC
ATCGCCCGCA CACCGGCGGA GCTGAAGAAG CACCTCACCC CCGACCTGTT CAAGCTCTAC
GAACTGATCT GGAAGCGCAC CGTGGCCAGC CAGATGGCCG AGGCGCTCCT GGACCAGACC
TCGGTTGACA TAGCGGCCGA GTTGAATGAG GCGGTGGCGG ACTGCACAGT CGCCGAGTCC
GGCGCAGCCA GCCCCTTTAC GGGCGCAAAG CGCTGCGGCC TGCGTGCGGC CGGCACGGTG
ATCCGCTTCC CCGGCTTCAT GAAGCTGTAC ATCGAGGGAC TGGACGACCA GGACGAGGAG
AAAGAGGGGC TGCTCCCCCC CTTGCAGGAG GGGGACGACC TGAAATTGCA CGAACTGTTT
CCCGAACAGC ACTTCACCCA GCCGCCGCCG CGCTACACCG AGGCCACCCT GGTCAAGACC
CTGGAGGAGT ACGGCATCGG CCGCCCCTCC ACCTACGCCT CGATCATGAA CACCCTGGTT
GAGCGCAAGT ACACCCGCCT GGACAAGAAG CGCTTCTTCC CCGAGGATGT GGGCATGGTG
GTCAACGACC TGCTGGTGGC CCACTTCTCC CGCTACGTGG ATTACAACTT CACCGCCGGC
CTGGAGGAAG AGCTGGACCA GGTTTCCCGG GGGGAGAAGC AGTGGAAGCC GCTGCTGAAA
GAGTTCTGGG AGCCGTTCAT CACCCTGCTG AAGCAGAAGG AGGGGGAGGT CAAGAAGGAC
GACTTGACCA CCACGGAACT GGACGAGGTC TGCCCGGAAT GCGGCAAACC GTTGGCCATC
AAACTGGGCA AGCGGGGCAA GTTCATCGCC TGCACCGGCT TCAAGGAGGG GTGCACCTAC
ACCCGCAACC TGGAATCCGA CGCCAGCGAG CCGTCCGAGC CGGTGCTCTC CGATGAGAAG
TGCGACAAGT GCGGTCAGCA GATGCTGATC AAGGACGGCC GCTATGGAAA GTACCTGGCC
TGCTCCGGCT ATCCGGCCTG CAAGAACATC CAGCCGCTGG TCAAGCCGCG CGGCACCGGC
GTGGTCTGCC CCGAGTGCAA GGAAGGCGAG CTGACCGAGA AGAAATCACG CTTCGGCAAA
CTGTTCTACT CCTGCAACCG CTACCCCCAG TGCAAGTTCG CCCTCTGGGA CCCGCCGGTG
GAGCAGCCCT GTCCCAAATG CGGCTTCCCG CTGCTGGTGA AGAAGGTCTA CAAGCGCAAG
GGTGAATTCC TCAAATGCCC CAAGGAAGGG TGCGACTACA CCAGCGAGTG A
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| Protein sequence | MPQNLVIVES PAKAKTIEKF LGKDYKVLAS FGHVRALPSK QGSVDIEQDF TPKYHILPES
KKHIDAIKAA LKDAKNLLLA TDPDREGEAI SWHLLAALGL DKKNPGKSIQ RVVFHEITKD
AIIHAVENPR DIATDLVDAQ QARSVLDYLV GFNLSPFLWK KIRYGLSAGR VQSVALRLVC
EREKEIQAFK EQEYWTIAAR LGVKPGAEFR ASLVEVGGKK LGKFDIPDEN VATALNRALK
SGSYRVAKIT RTERKRNPSP PFTTSTLQQE ASRKLGFSAK KTMSTAQKLY EGIDIGQEGT
VGLITYMRTD SVTLSSQALT EAHEVISAAY GAEYALAKPR IFKTKTKNAQ EAHEAVRPTS
IARTPAELKK HLTPDLFKLY ELIWKRTVAS QMAEALLDQT SVDIAAELNE AVADCTVAES
GAASPFTGAK RCGLRAAGTV IRFPGFMKLY IEGLDDQDEE KEGLLPPLQE GDDLKLHELF
PEQHFTQPPP RYTEATLVKT LEEYGIGRPS TYASIMNTLV ERKYTRLDKK RFFPEDVGMV
VNDLLVAHFS RYVDYNFTAG LEEELDQVSR GEKQWKPLLK EFWEPFITLL KQKEGEVKKD
DLTTTELDEV CPECGKPLAI KLGKRGKFIA CTGFKEGCTY TRNLESDASE PSEPVLSDEK
CDKCGQQMLI KDGRYGKYLA CSGYPACKNI QPLVKPRGTG VVCPECKEGE LTEKKSRFGK
LFYSCNRYPQ CKFALWDPPV EQPCPKCGFP LLVKKVYKRK GEFLKCPKEG CDYTSE
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