Gene Ppro_0514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0514 
Symbol 
ID4572885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp540502 
End bp541020 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content62% 
IMG OID639754551 
Productpeptide deformylase 
Protein accessionYP_900203 
Protein GI118578953 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.312606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGCA CCATTCTCAC CTACCCAAAT CCCGAGCTGA AAAAGAAATC GGCAGCGGTT 
ACCATCATAA CCGACGAGAT CCGCGAACTG GTCAGTGATA TGACCGAAAC CATGTACCAC
GCCCCCGGCG TGGGGCTGGC AGCCCCCCAG ATCGGCGTCC ATCAGCGGGT GATCATCATC
GATGTCTCCG CCCACGACGA GCCGAACGAG CTGATTATAG CAATCAACCC GGTCATCGTC
CATGCCGAGG GAGAGAGCTA CGAGGAGGAG GGCTGCCTGT CGGTACCCAA ATACGCCGCC
AACGTGCGCC GCCACGCCAG CGTGACGGTC AGGGGCCTGG ACCTGGAGGG GAGGGAACAG
ACCTGGCATG CCGAGGGGCT CTTGGCCATC GCCTTCCAGC ACGAGATCGA TCACCTGGAC
GGCAGACTCT TCGTCGACCA CCTCTCGCCC CTCAAGCGCG ATCTGTTCCA GCGCAGGGCC
CGCAAGGCGG CGGAAGCGAA AGCAGCGGGG GAGCGATGA
 
Protein sequence
MIRTILTYPN PELKKKSAAV TIITDEIREL VSDMTETMYH APGVGLAAPQ IGVHQRVIII 
DVSAHDEPNE LIIAINPVIV HAEGESYEEE GCLSVPKYAA NVRRHASVTV RGLDLEGREQ
TWHAEGLLAI AFQHEIDHLD GRLFVDHLSP LKRDLFQRRA RKAAEAKAAG ER