Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0514 |
Symbol | |
ID | 4572885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 540502 |
End bp | 541020 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639754551 |
Product | peptide deformylase |
Protein accession | YP_900203 |
Protein GI | 118578953 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.312606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCGCA CCATTCTCAC CTACCCAAAT CCCGAGCTGA AAAAGAAATC GGCAGCGGTT ACCATCATAA CCGACGAGAT CCGCGAACTG GTCAGTGATA TGACCGAAAC CATGTACCAC GCCCCCGGCG TGGGGCTGGC AGCCCCCCAG ATCGGCGTCC ATCAGCGGGT GATCATCATC GATGTCTCCG CCCACGACGA GCCGAACGAG CTGATTATAG CAATCAACCC GGTCATCGTC CATGCCGAGG GAGAGAGCTA CGAGGAGGAG GGCTGCCTGT CGGTACCCAA ATACGCCGCC AACGTGCGCC GCCACGCCAG CGTGACGGTC AGGGGCCTGG ACCTGGAGGG GAGGGAACAG ACCTGGCATG CCGAGGGGCT CTTGGCCATC GCCTTCCAGC ACGAGATCGA TCACCTGGAC GGCAGACTCT TCGTCGACCA CCTCTCGCCC CTCAAGCGCG ATCTGTTCCA GCGCAGGGCC CGCAAGGCGG CGGAAGCGAA AGCAGCGGGG GAGCGATGA
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Protein sequence | MIRTILTYPN PELKKKSAAV TIITDEIREL VSDMTETMYH APGVGLAAPQ IGVHQRVIII DVSAHDEPNE LIIAINPVIV HAEGESYEEE GCLSVPKYAA NVRRHASVTV RGLDLEGREQ TWHAEGLLAI AFQHEIDHLD GRLFVDHLSP LKRDLFQRRA RKAAEAKAAG ER
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