Gene Ppro_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0513 
Symbol 
ID4572884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand- 
Start bp539546 
End bp540505 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content67% 
IMG OID639754550 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_900202 
Protein GI118578952 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.690355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCA GGAGCATCGT CTTCATGGGA ACGCCCGAGT TTGCCTGCCC CACCCTGCAG 
GCCCTGATCG ACCGCGGAGA ACGGCTGCTG GCAGTGGTCA CCCAGCCCGA CAGGCCCAAG 
GGGCGCGGCC ACAAGCTGAT GCCACCCCCG GTTAAGGAAC TGGCCCTGGC CCACGACATT 
CCGGTGCTCC AACCCCACAG GGTCCGCGCT TCCGCCTTCG TCGAGAGCAT CCGCCAGCTG 
GCTCCCGAAC TGATCGTGGT GGTTGCCTTC GGACAGATCC TGCCCAAGGC GCTGCTGGAC 
ATTCCTCCCC TGGGCTGCGT CAACGTCCAC GCCTCCCTGC TCCCCCGCTA CCGAGGCGCC 
GCCCCGCTCA ACTGGTGCAT CATCAACGGA GAAACAGAGA CCGGCGTCAC CACCATGCTG 
ATGGATACGG GGCTCGATAC CGGTCCCATG CTGCTCAAGC GCTCGACCCC CATCGACGAG 
AATGAGGACA TCGTCTCGCT GCACGACCGC ATGGCCTCCC TGGGCGCGGA GCTGCTGGCC 
GAGACCCTGG ACGGCCTCCG GGAGGGGCGC ATCGAGCCGC AGCCCCAGAA CGACAGCCTG 
AGCTGCTACG CTCCGCTGCT CAAGAAGGAG CACGGCCTAA TCGACTGGCA GCGGCCTGCC 
CGCCAGATCC ACAACCAGGT TCGCGGACTG GCTGCCTGGC CCGGCGCCCA GACCCTTCTC 
AACGGCCATG CCCTGAAGCT GTTCCGCACC CGGGTAGCCG ATGGCGCGGG AGCTCCGGGA 
ACGGTGCTCT GCTCCACCGG CGGCCAGCTC GAGGTGGCCT GCCTGGACGG CAGCCTGCTC 
ATCCAGGAAC TGCAGCTGGC GGGCAAAAAG CGCTTGGACA GCGCCAGCTT CCTGGCCGGC 
TGCCCCATAG CCGAGGGAAC CCTGCTGGGC GGAGCGGCAA CGGAGAGACC GATACCGTGA
 
Protein sequence
MSSRSIVFMG TPEFACPTLQ ALIDRGERLL AVVTQPDRPK GRGHKLMPPP VKELALAHDI 
PVLQPHRVRA SAFVESIRQL APELIVVVAF GQILPKALLD IPPLGCVNVH ASLLPRYRGA 
APLNWCIING ETETGVTTML MDTGLDTGPM LLKRSTPIDE NEDIVSLHDR MASLGAELLA 
ETLDGLREGR IEPQPQNDSL SCYAPLLKKE HGLIDWQRPA RQIHNQVRGL AAWPGAQTLL 
NGHALKLFRT RVADGAGAPG TVLCSTGGQL EVACLDGSLL IQELQLAGKK RLDSASFLAG 
CPIAEGTLLG GAATERPIP