| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0478 |
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| Symbol | |
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| ID | 4572902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 500250 |
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| End bp | 501806 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639754516 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_900168 |
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| Protein GI | 118578918 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000102603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAGG AAACGAAAAA CGGCGCGGAA CGTCGCTTGA TCAGGATTTT CGATACGACG
CTGAGGGATG GCGAGCAGTC CCCCGGCAAC AGCATGAACA TGGAGGAGAA GCTGCGGGTT
GCCCGCCAGC TGGAAAAGCT GAACGTGGAT ATCATCGAGG CAGGCTTCCC CATCGCCTCG
GTGGGTGATT TCGAAGCGGT CAAGCGCATC GCCCAGACCC TGACGAAGCC CCAGATCGCC
GGGCTCTGCC GCTCCAGCGA CAAGGACATC GACCGGGCCT GGGAGGCGGT GCAGTACGCC
GGGGAGCGGG CGCGCATCCA CACCTTCATC GCCACCTCGG ACATCCACAT GAAGTACAAG
CTGCAGATGG AGCCGGCAAA GGTCTTGGCA ACGGCGGTCA AGGCGGTGAA GTACGCCAAA
GGCTACACCT CCAACGTGGA ATTCTCCTGC GAGGATGCGG TCCGCACACG GCTCCCCTTC
CTGGCCGAGG TGGTGGAGGC GACCATCGAT GCCGGCGCGA CCACGGTCAA CATCCCGGAC
ACCGTCGGCT ACACCACCCC CAGCGAGTTC TATAACATCA TCAGGTACCT GAAGGAGAAC
GTCTCCAACA TCGAGAAGGC GGTCATCTCG GTGCACTGCC ACAACGACCT GGGGCTGTCG
GTGGCCAACT CCCTGGCCGC CATCCAGGCC GGCGCCGGAC AGGTGGAGTG CACCATCAAC
GGCATCGGCG AGCGGGCCGG CAACTGCTCT CTGGAGGAGC TGGTCATGGT GCTGCGCACC
CGCCACGACA TCCTCCCCTA CTACACCAAC GTGGCCACCG AGCAGCTGAC CTCCTCCAGC
CGCCTGCTTA GCACCATTAC CGGCATCATG GTGCAGCCCA ACAAGGCCAT CGTGGGCGCC
AACGCCTTTG CCCACGAGTC GGGCATCCAC CAGCACGGCA TGATGATGGA TAGCTCCACC
TACGAGATCA TGACTCCCGA ATCGGTTGGC CTGGCCGCCG GCGCCCTGGT GCTGGGCAAG
CATTCCGGAC GCCACGCCTT CAAGAAACGG CTGCAGGAGT TGGGGCATGA GCTGGACGAC
GAGATGCTCA ACCGTGCCTT TGTCCGCTTC AAGGCCCTGG CGGACCTGAA GAAGGAGGTC
TTCGACGAAG ACCTGGACGC CATCGTGGCC GATGAATCCC GCGAAGAGGA GATGTACAAG
CTGGTGCTGC TCAACGTCTC CTGCGGTTCC CTCTCCGTGG CCACCGCCAC GGTCAAGATG
GAGATCAACG GCCAGCTGCT GCGCGCAGCC GAACTGGGCG ACGGTCCGGT GGACGCCACC
CTCAAGGCCA TCCGCAAGCT GACCAAGAGC AAGGCCAAGC TGGAGCAGTT CAACGTCGGC
TCCATCACCG GCGGCACCGA CGCCCAGGGG GAGGTGACCA TGAGGGTCTC GGACGGCAAC
CACCTGGTGG TCGGCAAGGG CTCCTCCACC GACATCATCG AGGCCTCGGC CAAAGCCTTC
GTCCATGCGC TTAACCGCCT CCACTACCGC CAGAAGAAGA TGAACGGCGG GGTGTGA
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| Protein sequence | MAQETKNGAE RRLIRIFDTT LRDGEQSPGN SMNMEEKLRV ARQLEKLNVD IIEAGFPIAS
VGDFEAVKRI AQTLTKPQIA GLCRSSDKDI DRAWEAVQYA GERARIHTFI ATSDIHMKYK
LQMEPAKVLA TAVKAVKYAK GYTSNVEFSC EDAVRTRLPF LAEVVEATID AGATTVNIPD
TVGYTTPSEF YNIIRYLKEN VSNIEKAVIS VHCHNDLGLS VANSLAAIQA GAGQVECTIN
GIGERAGNCS LEELVMVLRT RHDILPYYTN VATEQLTSSS RLLSTITGIM VQPNKAIVGA
NAFAHESGIH QHGMMMDSST YEIMTPESVG LAAGALVLGK HSGRHAFKKR LQELGHELDD
EMLNRAFVRF KALADLKKEV FDEDLDAIVA DESREEEMYK LVLLNVSCGS LSVATATVKM
EINGQLLRAA ELGDGPVDAT LKAIRKLTKS KAKLEQFNVG SITGGTDAQG EVTMRVSDGN
HLVVGKGSST DIIEASAKAF VHALNRLHYR QKKMNGGV
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