| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0465 |
|---|
| Symbol | |
|---|
| ID | 4572993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 487186 |
|---|
| End bp | 488916 |
|---|
| Gene Length | 1731 bp |
|---|
| Protein Length | 576 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639754503 |
|---|
| Product | aldehyde ferredoxin oxidoreductase |
|---|
| Protein accession | YP_900155 |
|---|
| Protein GI | 118578905 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2414] Aldehyde:ferredoxin oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGA TCTATCGCGT AAATATGACC GATTTGACGG TCAAACAGGA AGACGTTCCC
GCAGAGTGGG CACTACTCGG TGGCCGCGGA TTGACCTCAA CTATCGTAGC TGCCGAGGTT
CCGCCGACCT GCCATCCTCT CGGGCCGAAC AACAAACTGG TGTTTGCCCC GGGCCTTCTC
ACCGGTACAC CAGCAGCCCA GTCCGGACGT CTCTCCGCGG GCGCCAAGAG CCCGCTCACC
GGAGGCATTA ATGAGAGCAA CTCCGGCGGT ACCGCGGCAC AACTGCTGGC ACGACTTTGT
ATCAAGGCAC TGATCATCGA AGGTCAGCCA AAGGAGGACA AATGGTTCAA CCTGCACGTA
AACAAGGACG GTATCACCAT CCAGGAGGAA ACCGAACTCG TCGGCCAGAA CAACTTTGCC
ATCATTGATG CCGTTGAGAC TCGTCTGGGC AAAAAAACCG GCATCCTGAC CATAGGTATT
GCTGGTGAAC TCAGAATGGC AGCGGCAGAT ATTTCGGTCA AGGATCCTGA CAGCAAACTC
CGTAGCCACG GCCGCGGAGG CCTCGGCGCG GTTATGGGTT CCAAGAAGAT CAAGTTCATC
TCCATAGACG GCGAAGGTGC ACCCGGTGTC ACGATTGCCG CCCCGGATAA ATTCAAGGCT
GCCTCACGAG TCTTTGCCAA AGCCCTGCTC GACCACCCGG TCAGCGGTCA GGCCCTCCCC
ACCTATGGCA CCAACGTTCT GGTAAATATC ATCAACGAGG CCGGAGGATT GCCGACCCGC
AACTTCTCTT ACGGTCAGTT TGCTTCGCAT GACAAGATCT CCGGCGAAAC CATGCACGAC
ACAATCGTTG CCCGTGGTGG CAAACCGAAA CATGGTTGCC ATGCCGGTTG CATCATCCAG
TGCTCGCAGG TCTACCTTGA CCAGGACGGA AAATATCTTT CATCCGGTTT CGAATATGAG
ACCATCTGGG CTCTCGGTGC CAACTGTTGT ATCGAAAATC TGGATATCAT CGCGAAAGCC
GACAATATCA TGGACGATAT CGGTATCGAC TCCATTGAAA CCGCAGTCAT GTTCGGCGTG
GCAATGGAAG CCGGCATCAT CCCTTTTGGC GACGGCGAGG GAGTACTTCG CCTGCTCACG
GATGAAATCG CCAAGGGTAC ACCGCTCGGC CGCATCCTTG GTGGCGGTGC CGGTTCTGTG
GGGCGTGCCT ACGGTGTCAT CCGTGTTCCT GTCGTGAAGA ACCAGAGCAT TCCGGCCTAT
GACCCCCGTT CAATCAAAGG CATCGGTATC ACCTATGCGA CCAGCACCAT GGGGGCCGAC
CACACCGCGG GTTACTCCAT TGCAACCAAT ATCCTCAATG TCGGCGGCAA CGTTGATCCG
CTCAAGAAGG AAGGCCAGGT TGAGCTTTCC CGAAACCTGC AGATCGCAAC CGCCGCGATT
GACTCCACCG GCATGTGTAT CTTCGTGGCC TTTCCCGCCC TCGATATTCC TGAATGCCTG
CCGGCCCTGA TCGACATGCT CAACGCCCGC TTCGACAGCT CCCTTGCCGG CGACGACTTT
GTTGCCCTTG GCAAGCAGAT CCTCAAGGTC GAACGAAAAT TCAACATCGA AGCCGGGTTC
AACAGTGCTC ACGACCGCTT GCCCGAGTTC TTCACATACG AACCCTTACC GCCGCACAAC
GTTGTCTGGG ACTTCTCCGA CGAAGAAATC GATGAGTTCT GGAACTTCTA A
|
|---|
| Protein sequence | MDKIYRVNMT DLTVKQEDVP AEWALLGGRG LTSTIVAAEV PPTCHPLGPN NKLVFAPGLL
TGTPAAQSGR LSAGAKSPLT GGINESNSGG TAAQLLARLC IKALIIEGQP KEDKWFNLHV
NKDGITIQEE TELVGQNNFA IIDAVETRLG KKTGILTIGI AGELRMAAAD ISVKDPDSKL
RSHGRGGLGA VMGSKKIKFI SIDGEGAPGV TIAAPDKFKA ASRVFAKALL DHPVSGQALP
TYGTNVLVNI INEAGGLPTR NFSYGQFASH DKISGETMHD TIVARGGKPK HGCHAGCIIQ
CSQVYLDQDG KYLSSGFEYE TIWALGANCC IENLDIIAKA DNIMDDIGID SIETAVMFGV
AMEAGIIPFG DGEGVLRLLT DEIAKGTPLG RILGGGAGSV GRAYGVIRVP VVKNQSIPAY
DPRSIKGIGI TYATSTMGAD HTAGYSIATN ILNVGGNVDP LKKEGQVELS RNLQIATAAI
DSTGMCIFVA FPALDIPECL PALIDMLNAR FDSSLAGDDF VALGKQILKV ERKFNIEAGF
NSAHDRLPEF FTYEPLPPHN VVWDFSDEEI DEFWNF
|
|---|
| |