| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0427 |
|---|
| Symbol | |
|---|
| ID | 4573006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 448289 |
|---|
| End bp | 449332 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639754466 |
|---|
| Product | ribosomal RNA large subunit methyltransferase N |
|---|
| Protein accession | YP_900118 |
|---|
| Protein GI | 118578868 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
|---|
| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.273579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAA AAACCGACCT GAAAAACCTG ACCCTGCCTG CTCTGGAGCA GTTTCTGCGG
GGGCAGGGCA AGGAGCGCTT CCGCGCCACC CAGGTCTTCA AATGGATCTA CCAGCACGAT
GCCCGCAGCT TCCAGGAGAT GACCAACATA TCCAAGGATC TGCGGGCGGA GCTGGAGGCG
AAGGCGTACA TCAGCAACCT GGAGCCGGAG GCCGTTGAGG TGGGCGGCGA CGGTACGCGC
AAGTACCTGT TCGGCCTGGA AGACGGCAAT TCGGTGGAGT CGGTGCTCAT ACCGGACGAG
GGGCGCAACA CCCTCTGCAT CTCCTCCCAG GTGGGGTGCG CCATGGGGTG CGCGTTCTGT
CTCACCGGGA CGTTCAGGCT GACCCGCAAC CTGACCACGG CCGAGATCGT CAACCAGATC
ATGGCCGTGC GGCGCGATGT GGAGATACGC AACATCGTCA TGATGGGCAT GGGGGAGCCG
CTGCACAACC TGGATAACGT CATCCCGGCC ATCCACATCA TGATCGACGG TAATGGCCTG
CAGCTCTCCA ACCGCCGAGT CACGGTCTCC ACCTGCGGAC TGGCGCCGGA GATGGAGCGA
CTTGGCCGGG AGTTGCCCAA CGTCAATCTG GCCGTATCGC TGAACGCCAC CACCGACGAA
CTGCGCGACC GGATCATGCC GATCAACCGC CGCTATCCGC TGAAGGAGCT GCTCAGCGCC
TGCCGGGAGT TCCCGCTTCC CGGACGCCGC AAGGTCACCT TCGAATACGT CATGCTGGGG
GGGCTGAACG ACACGCTGGA GGATGCCAAG CGGCTGTTGC GCCTGACTAG CGATATCCCC
AACAAGGTCA ACCTGATTCC CTTTAACGAG TTCCAGGGGT GTGAATTCCG CTCTCCCACC
CGGGCGGCCA TCGATGCCTT TCACAAATAC CTGATCGACC GCCATGTGAC GGTGATTACC
CGCGACAGCC GCGGCAGTGA CATCTCCGCT GCCTGCGGCC AGTTGAAGGG AAAGCTTGAC
GCGGCTAGAC AGCCGACGGA ATAG
|
|---|
| Protein sequence | MTEKTDLKNL TLPALEQFLR GQGKERFRAT QVFKWIYQHD ARSFQEMTNI SKDLRAELEA
KAYISNLEPE AVEVGGDGTR KYLFGLEDGN SVESVLIPDE GRNTLCISSQ VGCAMGCAFC
LTGTFRLTRN LTTAEIVNQI MAVRRDVEIR NIVMMGMGEP LHNLDNVIPA IHIMIDGNGL
QLSNRRVTVS TCGLAPEMER LGRELPNVNL AVSLNATTDE LRDRIMPINR RYPLKELLSA
CREFPLPGRR KVTFEYVMLG GLNDTLEDAK RLLRLTSDIP NKVNLIPFNE FQGCEFRSPT
RAAIDAFHKY LIDRHVTVIT RDSRGSDISA ACGQLKGKLD AARQPTE
|
|---|
| |