Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0393 |
Symbol | |
ID | 4573057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 402964 |
End bp | 404460 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639754432 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_900085 |
Protein GI | 118578835 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00582053 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCTCAA CCGCAAAGAA AACATCTCTG TTAGCGCTTG CAGGCCTGTT GTGTCAGGCC CTGCCCGCCC TCGCGGCCGA ACCGGCCCAC TCGCTGCTGG CGGAGTTGAG CCGTCCGTCC ACCCCGCACT CTTCCAGCGC TGAGGCGCCC GCTCTGCTGT CGCAGGTTGA ACGCCAGGGC GAGAACGTGC CTGGGCTGGT GTCGGAGCTT TTTTCCCTTG AGGAGATCAA GGGCAGGGGG GTGGAAGGTG TTGAGCTTGA ACTGCCCGAA ATCGATTTGC CTCTGTCCGA TATTCCCCTG ACCTTCAACA GCAAAGTCGA GTACTTTCTC TATTACTTTC AGACCAATGG CAAACCCTCA TTTTCTCGCT GGCTCTCCCG CTCATCCCGC TATATCCCGA TGATGAAGGA AATCCTCAGG GGCAAGGGAC TGCCCGAAGA TCTGGTCTAT GTGGCGATGA TTGAGAGCGG TTTTCACCTG CAGGCCCGCT CCTGGGCCAA TGCCGTTGGT CCCTGGCAGT TCATCTCCGA AACCGGCCGG CGCTATGCCC TGCGCATCGA TCAGTGGGTC GATGAACGCA AAGATCCGGT CAAGGCGACC ACAGCGGCTG CCCTCTATCT GAAGGAACTG TACGGGATGT TCAACGGTGA CTGGTACCTT GCGGCCGCGG GGTATAACGC CGGTGAGAAC AAGATCCTGC GCGCCATAAA TATGTATAAC ACCAGCGACT TCTGGGAACT CTCCCGTGGT TCCTATCTCA AGCGGGAGAC CAAGGAGTAT GTTCCAAAGC TGCTGGCCGC CGCCATCATC GCCAAGGAAC CGGCCCGCTA CGGTTTTTCC GATATCGCCT ATCTGCCGCC GATCGAGTTT GATACGGTCA CCGTTCCGAC CCGCACCGAC CTTGACTTGG TGGCCCGACT CACCGGTACC ACCTATGAAG CCATCAAGGA GTTGAACCCC GATCTGCTCC ACTGGTGTAC GCCCCCCAAC TATCCGGATT TTACCCTCAA GCTTCCCAAG GGGACCAAGA AGAGATTCAT CGCTGGACTG GCGAACATTT CCGTCGAGCA GCGCTTCACC GAAAAACTGC TGTATACCCG ATACCAGGCT CGCAGGAACG ATACGATCGC ATCCGTTGCA CGTCGTTTCA ATGTTTCACC GGAAGCCCTG ACTCAGCTGA ACGGGCTCTC CAAGAGGAGC CACATTTCCG GCAGATCGCT GATCGTACCG GCCAGGCAGA TGGGTGCTCC CGTTGACCAG GTGCGAACCG CCTCGGCGCC GAAAAACAGC CCAAAGGGGG AGTACGCCAA ATACCACGTC GTGAAAAAGG GTGATACGCT GGAGTCCCTC GCCCGGAAAT TCAAGGTTTC CGCGAAGCTC CTCTCGGCCT GGAACAATCT GAAGGGCAAG ATTGCTCTCA AGCCGGGTCG GCGCATCATC GTTGCCCGCT TTATCGAAAA AAACGGAGAG ATGGTTCCCA CCGGCAGCAA AGGCTGA
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Protein sequence | MLSTAKKTSL LALAGLLCQA LPALAAEPAH SLLAELSRPS TPHSSSAEAP ALLSQVERQG ENVPGLVSEL FSLEEIKGRG VEGVELELPE IDLPLSDIPL TFNSKVEYFL YYFQTNGKPS FSRWLSRSSR YIPMMKEILR GKGLPEDLVY VAMIESGFHL QARSWANAVG PWQFISETGR RYALRIDQWV DERKDPVKAT TAAALYLKEL YGMFNGDWYL AAAGYNAGEN KILRAINMYN TSDFWELSRG SYLKRETKEY VPKLLAAAII AKEPARYGFS DIAYLPPIEF DTVTVPTRTD LDLVARLTGT TYEAIKELNP DLLHWCTPPN YPDFTLKLPK GTKKRFIAGL ANISVEQRFT EKLLYTRYQA RRNDTIASVA RRFNVSPEAL TQLNGLSKRS HISGRSLIVP ARQMGAPVDQ VRTASAPKNS PKGEYAKYHV VKKGDTLESL ARKFKVSAKL LSAWNNLKGK IALKPGRRII VARFIEKNGE MVPTGSKG
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