| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0336 |
|---|
| Symbol | |
|---|
| ID | 4573102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 336070 |
|---|
| End bp | 338067 |
|---|
| Gene Length | 1998 bp |
|---|
| Protein Length | 665 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639754374 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_900028 |
|---|
| Protein GI | 118578778 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTATG CTCCGCAGGT GGGGGGCGAC CCTGCATTCC TGGCGATAGT TGCCGCGCTT
GCCATGGGCT GCGCCGGTCT CCCCGGCCTG TTCATGCGCA CACCCGGCCC CGGACAGATC
CTGGCCACGG GTATCACGAT CCTGGCCAGC CTGGCCGGCA TTCCGGCAGC GCTGATGCTG
CTGTTCAGCG ACAGGGTCCC GGCCTATGTT CTTGAATGGG GACTCCCCTT CGGACCGTGC
GAACTGGCCA TCGATCCGCT CTCGGCCTTT TTCCTGCTGC CGGTCTTTCT GGTGGCCGGG
GCGGGATCGC TCTTTGCCCT GGGGTACTGG CCTGCCACAA AGAATCGCGG CAGCGAGCCC
ATGCTGACGT TTTTTTACGG CCTTCTGGCC TCATCGATGG CGATACTGCT CATGGCGCGT
AACAGCGCCT TTTTTTTGAT GGTATGGGAG GTCATGGCGC TGTCGGCCTA TTTCCTGCTG
GTAACGGAGC ATGGCCGGGA GGACGTGCGG CGGGCCGGAA TCGTCTATCT GGTTGCCACC
CATTGCGGCA CCGCCGCCCT GTTCGTCTAC TTCTCCCTGC TGGCCAGCAG CAGCGGCTCG
TTCCTCCTCC CCCCTGCCGG CTCGCTCTCC GCGCTGCCGG CCGCCTCCCT GGCCATTGCC
CTGGCGGCCT TCATCGGCTT CGGCGCCAAG GGGGGCATCA TGCCGCTGCA CATCTGGCTC
CCATCGGCCC ACGCCAACGC ACCCAGCCAC GTCTCCGCCA TGATGTCCGG GGTCATGCTC
AAGATGGGGC TCTACGGCAT CTTCCGCACC CTGACCTTTT TCCGCGACCC GCCGCTCTCC
TGGGGAGCCT TTCTGGCCCT GACCGGAATC GCCTCGGCCC TGCTGGGCAT CTCCTTCGCC
GTTGCCCAGT GTGACCTGAA GCGCCTACTG GCCTGCAGCA GCATCGAGAA TATCGGCATC
ATCACCACTG GCCTGGGGGT GGCCATGATG GGCATCTCCA GCCACAACAC GACCCTGGCC
TACCTGGGCA TGGCGGGCGC CATGCTGCAC ATCCTCAACC ACAGCCTGTT CAAACCGCTG
CTCTTCCTCG GTTCCGGTGC CATCATCCAC GCCAGCGGAA CGCGCGACAT GAACCTGATG
GGAGGGCTGG CCAAGGGGAT GCCGAAGACG GCCTTCCTGG TTCTGGTCGG CTCCCTGGCC
ATCTGCGGCA TTCCCCCCCT GAACGGTTTT GTCAGTGAAT TCCTGCTCTA CCTGGGCTTC
TTCTCCCAGC TCCAGGCCGC AAGCCTGACC TTCCTGGTGC TGTTGGCGCC GCTCCTGGCG
CTGGTGGGGG GGCTGGCGCT GATTGCCTTT ACCAAGCTGT ACTGCTGCAT TTTCCTCGGT
GTACCCCGCA ATGTGGAGGC CGGCCATACC CATGAGGCGG GTCCTGCCAT GCTGATTCCC
CTGGCGCTCC TGGCGCTGCT CTGCCTGCTG GTCGGTCTCT TGCCCCAGTA CGGGCTGCGC
CTGGTTGAAC CGGCCCTGGC GCTGTTCGTT CCGCCCGGGG CGAGCGCCAC CCTCTCCCTG
GGCTATGCCT TGACCCTAGA GCAGCTCTCG CAGCTTGGGC TGTTCCTGCT GCTGGTTTCG
GCCCTGGTGT TCTTTTTTTG GCGCATGCTC TTGGCGCGGG CGCCCCAGGC CAGCGGACCC
ACCTGGGGAT GCGGCTATCA GCGGGGAACG GCGCGGATCC AGTACACGGC CACATCGTTT
TCCGAGTACG CCGTTTCCGT CTTCAACGGT TTCATCCGCC AGCGCATCCA GCGTCCCGCC
CTGGCGGGGC TCTTTCCGCT GACGGCCGAC TGCGTTGACC GGCCCACGGA GACAGTGCTG
GACCGGATCA TCGCTCCGCT GTTCACCCTG GCCGGGCTGC TGTTCGCTTT TCTGATGCGC
CTGCAGCACG GCCGGATGCA TGTGTACATG ATCTATATCT TTGCCACGCT GCTGATCCTG
ATGCTCTGGG CACACTGA
|
|---|
| Protein sequence | MFYAPQVGGD PAFLAIVAAL AMGCAGLPGL FMRTPGPGQI LATGITILAS LAGIPAALML
LFSDRVPAYV LEWGLPFGPC ELAIDPLSAF FLLPVFLVAG AGSLFALGYW PATKNRGSEP
MLTFFYGLLA SSMAILLMAR NSAFFLMVWE VMALSAYFLL VTEHGREDVR RAGIVYLVAT
HCGTAALFVY FSLLASSSGS FLLPPAGSLS ALPAASLAIA LAAFIGFGAK GGIMPLHIWL
PSAHANAPSH VSAMMSGVML KMGLYGIFRT LTFFRDPPLS WGAFLALTGI ASALLGISFA
VAQCDLKRLL ACSSIENIGI ITTGLGVAMM GISSHNTTLA YLGMAGAMLH ILNHSLFKPL
LFLGSGAIIH ASGTRDMNLM GGLAKGMPKT AFLVLVGSLA ICGIPPLNGF VSEFLLYLGF
FSQLQAASLT FLVLLAPLLA LVGGLALIAF TKLYCCIFLG VPRNVEAGHT HEAGPAMLIP
LALLALLCLL VGLLPQYGLR LVEPALALFV PPGASATLSL GYALTLEQLS QLGLFLLLVS
ALVFFFWRML LARAPQASGP TWGCGYQRGT ARIQYTATSF SEYAVSVFNG FIRQRIQRPA
LAGLFPLTAD CVDRPTETVL DRIIAPLFTL AGLLFAFLMR LQHGRMHVYM IYIFATLLIL
MLWAH
|
|---|
| |