Gene Ppro_0216 details

Gene Information

• Locus tag: Ppro_0216
• ID: 4573362
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 211797
• End bp: 212288
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 639754255
• Product: DNA repair protein RadC
• Protein accession: YP_899910
• Protein GI: 118578660
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2003] DNA repair proteins
• TIGRFAM ID: [TIGR00608] DNA repair protein radc

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTTA ATCTCTTCGG TGAACCGGTA CCGCCGGTCA CTAAACGAAT CATGGTGCGC 
TCAATTGAGG CCCGCTACAG AAACGAAGTC GTGCGCGACG ATGCTCCGGA ATGGGTATCG 
ATGCGCTTCA CGAAACCAGA GCAGGTCTAT GAGATGTTCC GGGATCTCCG GCGTGAGACG 
AAGGAGCATT TTGTGGTGTT GCATCTCGAC GGCAAGAACC GGATCGTCTG TTTTGACCGG 
GTCTCCATCG GTTCGCTCAA CCAGGCCATC GTTCATCCCC GGGAGGTGTT CAAGACGGCA 
TGCCTGTCGA ATGCGGCAGC CATTCTGCTT GTTCACAACC ATCCGACCGG AGATCCGAAC 
CCCAGCAGCG AAGATATCGC CATCACCAAG CGTCTCAAGG AGAGCGGCGA CATCCTCGGC 
ATCCGGGTAC TGGATCACAT AATCGTCGGT GATGACGAGT TCCTGAGTTT TGTCGAGCGG 
GGACTTTTAT AA 

 

Protein sequence

MNFNLFGEPV PPVTKRIMVR SIEARYRNEV VRDDAPEWVS MRFTKPEQVY EMFRDLRRET 
KEHFVVLHLD GKNRIVCFDR VSIGSLNQAI VHPREVFKTA CLSNAAAILL VHNHPTGDPN 
PSSEDIAITK RLKESGDILG IRVLDHIIVG DDEFLSFVER GLL