Gene Ppro_0147 details

Gene Information

• Locus tag: Ppro_0147
• ID: 4573485
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 156727
• End bp: 157434
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 639754186
• Product: ABC transporter related
• Protein accession: YP_899841
• Protein GI: 118578591
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGGTA CCGGCATAGT TATAGAAGGG TTACGCAAAC GCTACGGTGA AGGCGACGCA 
GCTGTCGATG CCCTGAAAGG GGTTGATATG CGGGTCGCTC CCGGCGAGGT GGTGGGTCTG 
ATCGGTCCTT CCGGTTCCGG CAAAAGCACC CTACTCAAAT GCCTGGGGGC GGTGACTGAG 
CCGACAGCCG GACGAATGAC ACTGGGGGGC GAGGTGATCT TCGAGGACGG CTGGAAAGTC 
CGCGACCTGA GGGCTTTACG GCGCGACCGG ATCGGCTTCG TCTTTCAGGC CCCCTACTTG 
ATCCCGTTTC TGGATGTCAC CGACAACGTG GCACTGCTGC CGATGCTGGC GGGTGTGCCG 
AACGGCGAAT CGCGCTCGCG GGCTCTTGAA CTGCTCACTG CGCTGGATGT GCACCACCGC 
GCCAAAGCGA TGCCGTCACG CCTTTCCGGC GGCGAACAGC AGCGGGTTGC GATCGCCCGG 
GGCCTGGTCA ACCGGCCGCC GGTGATTCTG GCCGACGAAC CGACCGCACC GCTGGATTCA 
GAGCGTGCCA TGGCGGTTGT CCGTATCCTC AACACCATGG CGCGCACGTT TCAGACCGCC 
ATTATCGTCG TTACCCACGA TGAGAAAATT ATCCCCACCT TCAAGCGCAT CTATCATATC 
AGGGACGGCG TGACCCATGA AGAGGCCGGC GAAGGGCGGG AATTCTAA 

 

Protein sequence

MSGTGIVIEG LRKRYGEGDA AVDALKGVDM RVAPGEVVGL IGPSGSGKST LLKCLGAVTE 
PTAGRMTLGG EVIFEDGWKV RDLRALRRDR IGFVFQAPYL IPFLDVTDNV ALLPMLAGVP 
NGESRSRALE LLTALDVHHR AKAMPSRLSG GEQQRVAIAR GLVNRPPVIL ADEPTAPLDS 
ERAMAVVRIL NTMARTFQTA IIVVTHDEKI IPTFKRIYHI RDGVTHEEAG EGREF