Gene Ppro_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0100 
Symbol 
ID4573543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand- 
Start bp115768 
End bp116475 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content53% 
IMG OID639754142 
Producthypothetical protein 
Protein accessionYP_899797 
Protein GI118578547 
COG category[S] Function unknown 
COG ID[COG5397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00486405 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAATAC AATTTAAGAA GAGTCCCTTC TTTGAGCAAG ACGTAACCGA CCTTCTCCGG 
GAACTCTCGG GGATCGGTTT TTTCACGCAT GGGCTTCTAA TCGGCAGTTG GCCGATGGTG 
GTATATGCGG AGCATTTCAC TCTAATGTAC GGTCTGAGGA CTGGCGACAT TGATTTTGCT 
GTGATTGGTG CCATGAGGGT GCCTCCGGCG CCCCCTGAAA CCGTCCCGGA AGTTCTGGAT 
CGATTGGGGT ATTCGCCGGT CCAGGATTAC GATGCTGGCA TTGAAACCTT TCTTCATGGG 
GAATTCGAGG TCGAATTTAT AACTCATCGT AAAGGCGGTG GCCGCGGAGA AGGATCGGTC 
CTGGTCCAGC CTTGGAAGGT GGCGGCCCAG CCCCTACCTT TCATTGATCT TCTTTTCGTC 
CGGCCGGTGA CTATCGTCAT CGAGGATTTT AGTATTTCCA TTCCTTCGCC TGAGGCTTTG 
ATGCTGCATA AGCTTATCAT CGCCCAGCGT CGAACTGGGA AGGACAAGGA ACTGAAAAAG 
GAAAAGGACC TGCAACAGTG CTCGGTGCTG GTCGAGGTGG CTCGTCCCGA AGAGGTCCAA 
CAACTTCTCG CGGAATATAA GATGTCGCGT GAGGTCCAGC GGCAAATGGA AATGTCATGC 
GCAGAGGCGG GAATAGCTGT GCCCGGCGGA TTGCCTTGGC AGAAGTAA
 
Protein sequence
MEIQFKKSPF FEQDVTDLLR ELSGIGFFTH GLLIGSWPMV VYAEHFTLMY GLRTGDIDFA 
VIGAMRVPPA PPETVPEVLD RLGYSPVQDY DAGIETFLHG EFEVEFITHR KGGGRGEGSV 
LVQPWKVAAQ PLPFIDLLFV RPVTIVIEDF SISIPSPEAL MLHKLIIAQR RTGKDKELKK 
EKDLQQCSVL VEVARPEEVQ QLLAEYKMSR EVQRQMEMSC AEAGIAVPGG LPWQK