| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0084 |
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| Symbol | |
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| ID | 4573595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 97153 |
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| End bp | 101211 |
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| Gene Length | 4059 bp |
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| Protein Length | 1352 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639754127 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_899782 |
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| Protein GI | 118578532 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCCG CAAAACTCAA CAACACCGTG GTATTCACTA TTGTCTTTTT CATTTCAATC
TGCGGCGTCT GTTTCGCCGA TCCGCTGACC ATTACCGGCC CCGACGCGCC GAGCGATGGC
TCACAATACT CTGCAACAGG AGGAAGCGCC CCCTATTACT GGTGCATTAC CAAAGGGAGC
ATCACCCACA ACGGCGTTGT GACGGTATCG GGCCAGTGTG GCAGCGCAAC AATCACCGTT
TGGGATTCCA GCGGAGAAAC CGCACGCAAG ACAATAAGAA TGGCCGGCAC GTCACGATGG
GTTCAAACGG ATTACAAGAC GTGCCCCTCG TTCACGTGCG CGGGCTCCGG ATGCCCATGC
ACGGGGGGAT GCAGTTGGGT GTGGGGATGC ATCTTTTCTT CATACTATCC CGTCGAGATC
AGCGGCAACA TCAAAAAGGT TGGCAGCGCT TGGACCTGCG CTTCATCCAA TGGGAGGGGG
TGCCTGGTAT GGACCGGCCC CCCGCCACCG GGTGTGTCAT GCAGTGGTTC ACAACTTCAG
CTGGTCAGCT CGATCACGAC GTATGAATGG AAATGCCAGG ATGGGACCAA CGGCCCGGAA
TCTTCCTGTT CATCACCTCC GGTTCCCCTC AAAAAACCCA AAGATCTCGG CGCCGGCACC
GCCAACGCGA CCTGCACCGA GTCCGCCGCC AACCTGAAGA GCGGCAACTA CTACCACTCC
CAGAGCATCG TTGCCAGGCC CGAGAGCCTG AGCCTCGACC TCTCCTACAA CAGCCTCGAA
ACCGGGGACA CTCCCCTCGG CAGGGGGTGG ACCCACAGCT TCAACCTGAG TCTCGCCACG
ACCAGCAGCG GCCTACGGGT GAAGCTTGCC GACGGCGATT TTCTCGACTT CGTCCTTTCC
GGCACAACCT ACCTTCCCGC ATCCACCAGC ACTGACACCA GCAACATCGT TAAAACAACC
GAGGGAAGCT ACGTCCGGAC CTTCAGGGAC GGCCTCACCC AGACCTTCAA TGCCTCGGGC
CAGCTCACCG CCATAAGCGA TGCGAACGGC AACACGACGA CCCTGGCTTA TTCGGGGAAC
GATCTCGCAA CCGTCACTGA CTCCACCAGC CGCAACCTCA CCATCGGCTC CAGCGACGGC
AGGATCATTG CCATCCAGGA TCCGGCCGGC AGAATGACCA GCTTTGCCTA CAGCGGCAAC
CTACTGACCT CGGTAACCGA CCCGGCCGGC ACCAGCTGGC GGTTCGTTTA TGACGAATAC
GGCAGGATGA TCCGGAAAAC CGATCCCGGC AACAACACCA GCGAAAACGG CTATGACGCC
GCCGGCAGGA ACATCAGCAG CACCGATGCC GAAGGCAGGA CAAAAACCAT CAGCTACAAT
GCCACGGGCA GCAGCAGCGT CACCGAGAAG GACGGCAGCG TCTGGACCCA CGCCTACGAC
CCGACCCTGA ACGTCCCCAC GGCGACAACC GATCCCTTAG GCAACACCGT ACGACGGAGC
TACGACGCCA AGGGCAACCT GCTGAGCATC ACCGATCCGG ACGGAAACAC GACCCGCTAC
ACTTACGACG CGGCCAACAA CCCGCTCACC GTGACTGATC CCCTGGGCAA CACAACCAGC
TACACCTACG ACAGCCTGGG CCGGGTGCTG ACAATCACCG ACCCGGATGG CCGCATCACC
ATTAACAGCT ACGATGAAAG AGGGAACCTG CTGCGGAGCG TAGATCCCAC GGGGGGTGCC
TACCTGTTCG CCTACGATGC CGCCGGCAAC CTGACAAGCG TAACCGACCC GCGCGGCAAC
AGGGTCGGCT ACGTTTATGA CACCTACAAC ACTATCGCCG CGATCACCGA CCAGAACGGA
AAGACTATCC GCTTCAGCCA TGACATATCG GGTAACCTGC TGACCATGAA GGATCCGGAC
GGCAAGATCA CCACCTACTC CTACGATGCA CTGAACCGCC TGGTCGCCAT CACCGATCCC
CTGGGAACCA CCACGAAATT CACCTACGAC AACCTGGGTA ACCGCACCGC CGTAACTGAC
GGGAACGGCA ACCTCACCAG CTACACCTAC AACTTCAGAA ACAAACCGCT GACCATCAGG
GATGCGCTCG GCAGCACGAC AACTCTTGCC TACGGCGGCT GCGGCTCCTG CGGCGGCGGG
GGCAACGACA AACTTACCTC CCTCACCGAC GCCAACAACA ACCTGACCGG GTACGAGTAC
GACCAGCTCG GACGCCTTGC CCGCGAGACC GACCCTCTCG GCAATGTCAC CGGCTACGGC
TACGACTCCC GGGACAACCT CACCGCCAGG ACCGACGCCA ACGGCAGCAC CGCTACCTAT
GCCTACGACG CCAACAACCG CCTGCTCAGA AAAACCTACC CAGACGGGAG CGTGGAGAGC
TTCAGCTACG ACGCCAGAGG TAATATCCTC ACCGCCGCGA ACAAACATAT CTCCTACGCC
TTCAGCTACG ACGCCAACAA CAGGATGCTC TCGTCCACCG GCTCCAACAA TGGGACCCTG
AAGTACGAAT ACGACCCGGC CGGCAACCGT ACCACCATGG TCACCCCCGA AGGTGAGCGG
ATCAGCTACC GCTACGACGC CGCCAACCAC CTCACCGCCA TCGTCTCGCC CCGGGGGACC
TTCGATATCA CCTACAACGA CCTGGGCAGG AGAACGAAAC TCAGCTATCC CAACGGAGCA
ACCATAAGCT ACCGCTACGA CAACTCCGAA CGGCTGGTGA AACTGGAGCA TAAAACAAGG
CACGGCAGGA CAATCGACAG CTTTTCCTAT ACCCTGGACC GGGTCGGCAA CCGCCTGAGC
ACAACCGAAG CCAACGCAAC CACCAACTAC GGCTATGACG CCATCTATCG TCTGCTTTAC
GCACAGCAGA GCCGTCGCCA CAACAGCAGA GATAACGAAC AGTACAGCTA CGATCCCGTC
GGCAACCGAC TTATCGGGCC CCACCAGCAA ACCGGCTACA GTTATGGAAC CGGCAACCAG
CTGCTTAAGA ACGATCAGGC AAGCTTCACG TATGACAAGA ACGGCAACCT TGCCGAGCGA
AGCCTGGACA ACGATCAGCA TGGCCACCAC GGCCATCAAA GTACGTCCTG GAAGTACACC
TTCGATTATG AGAACCGGCT GGTGAAAGCC GAGAACGGCG CCGTCAACGT GAGCTTCGCC
TATGACCCGT TCGGCAGGAG AATCGAGAAG AGGACCGAGA TCACCGGTCC CGGTGAACGC
GGTCATGACG TAGAGGAGGG GATCACCCGT TACCTGTACG ACGGGATGAA CCTGATTCGG
GAGACCCGAG AGAGGCACCG CCATGCCGGC CGTTCCGAGA CGATCAGCTA CCTCCATGGC
CCGAACATCG ACGAGCCACT GGCGGCCATG AGTGACCACA GGAGTTGGTA CTACCATGCC
GACGGCCTGG GAAGCATCGT GGCGCTTACG GACAGACATG GTACCGTGGT ACAGGAATAC
AACTACGACA GCTTCGGCAA CCCTGATCAG CGGGGAGAGA ACATCGATCA GCCGTTCTCG
TACACAGGAA GGGAGTGGGA CCGGGAGACC GGGCTGTACT ACTACCGCGC ACGGTACTAT
GATCCCAAAA TCGGTAGGTT CATCCAAAAG GATCCGATAT CATTCGCTGG CGGGGATGTG
AACCTTTACG CTTACGTCTT AAATAATCCG ATTAATCGAT TAGATCCGTT CGGACTTTGG
AATAGCAAAA CATTTCCTAC AAATATCAGC AACTATGCCA ATAGTGCACT ATATTGGCCT
GGATCAAAAT ATCAACCAAT AGGGCCTTTT GGTAAAATTT GTGGCGCAGA AGGAACTGTT
GAAGCGACTT GGATACCAGA TATAACACCG GAAGCTTGCC GAAAACATGA CGAATGTTAT
GACAAATGTG CAAAAAAATG TGCCGGATAT GATTGTAAAA AAATATGTGA CTCGAAATTG
TTTAGATCAA ATCCACCGTA TGGAACAGCA ACAAAACTAT ATGGAAAGGA TGCATATGAC
GCTGCAAAAA GAAAATATGG CTGTAACAAA TGCAATTAA
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| Protein sequence | MKPAKLNNTV VFTIVFFISI CGVCFADPLT ITGPDAPSDG SQYSATGGSA PYYWCITKGS
ITHNGVVTVS GQCGSATITV WDSSGETARK TIRMAGTSRW VQTDYKTCPS FTCAGSGCPC
TGGCSWVWGC IFSSYYPVEI SGNIKKVGSA WTCASSNGRG CLVWTGPPPP GVSCSGSQLQ
LVSSITTYEW KCQDGTNGPE SSCSSPPVPL KKPKDLGAGT ANATCTESAA NLKSGNYYHS
QSIVARPESL SLDLSYNSLE TGDTPLGRGW THSFNLSLAT TSSGLRVKLA DGDFLDFVLS
GTTYLPASTS TDTSNIVKTT EGSYVRTFRD GLTQTFNASG QLTAISDANG NTTTLAYSGN
DLATVTDSTS RNLTIGSSDG RIIAIQDPAG RMTSFAYSGN LLTSVTDPAG TSWRFVYDEY
GRMIRKTDPG NNTSENGYDA AGRNISSTDA EGRTKTISYN ATGSSSVTEK DGSVWTHAYD
PTLNVPTATT DPLGNTVRRS YDAKGNLLSI TDPDGNTTRY TYDAANNPLT VTDPLGNTTS
YTYDSLGRVL TITDPDGRIT INSYDERGNL LRSVDPTGGA YLFAYDAAGN LTSVTDPRGN
RVGYVYDTYN TIAAITDQNG KTIRFSHDIS GNLLTMKDPD GKITTYSYDA LNRLVAITDP
LGTTTKFTYD NLGNRTAVTD GNGNLTSYTY NFRNKPLTIR DALGSTTTLA YGGCGSCGGG
GNDKLTSLTD ANNNLTGYEY DQLGRLARET DPLGNVTGYG YDSRDNLTAR TDANGSTATY
AYDANNRLLR KTYPDGSVES FSYDARGNIL TAANKHISYA FSYDANNRML SSTGSNNGTL
KYEYDPAGNR TTMVTPEGER ISYRYDAANH LTAIVSPRGT FDITYNDLGR RTKLSYPNGA
TISYRYDNSE RLVKLEHKTR HGRTIDSFSY TLDRVGNRLS TTEANATTNY GYDAIYRLLY
AQQSRRHNSR DNEQYSYDPV GNRLIGPHQQ TGYSYGTGNQ LLKNDQASFT YDKNGNLAER
SLDNDQHGHH GHQSTSWKYT FDYENRLVKA ENGAVNVSFA YDPFGRRIEK RTEITGPGER
GHDVEEGITR YLYDGMNLIR ETRERHRHAG RSETISYLHG PNIDEPLAAM SDHRSWYYHA
DGLGSIVALT DRHGTVVQEY NYDSFGNPDQ RGENIDQPFS YTGREWDRET GLYYYRARYY
DPKIGRFIQK DPISFAGGDV NLYAYVLNNP INRLDPFGLW NSKTFPTNIS NYANSALYWP
GSKYQPIGPF GKICGAEGTV EATWIPDITP EACRKHDECY DKCAKKCAGY DCKKICDSKL
FRSNPPYGTA TKLYGKDAYD AAKRKYGCNK CN
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