Gene Ppro_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0045 
Symbol 
ID4573748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand+ 
Start bp52814 
End bp53902 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content64% 
IMG OID639754088 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_899743 
Protein GI118578493 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0146911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAAT CGTACAAAAT CGCGGTCCTG GCCGGCGACG GCGTCGGTCC CGAGGTTATG 
GCCGAGGCGC TTAGAGTGCT GGACTGCGTT GAGCAGAAGT ATGGCGTCAC CTTCCAGCGC 
ACCCCGGCCA ATGTGGGGGG CGCGGGCATC GACAACGAGG GCAAGGCGTT GCCGGAGAGC 
ACCGTGAATA TCTGCCGGGC GTCGGACGCC ATCCTGTTCG GTTCCGTGGG CGGCCCCAAG 
TGGGAGAACC TGCCGGCTGA AGAGCAGCCC GAGCGGGGCG CGCTTTTGCC GCTGCGCAAG 
ATCTTCGGCC TGTACGCCAA CCTGCGGCCG GCCATCATTT TTCCGTCCCT CACCGGCGCC 
TCGTCCCTGA AGGAAGAGGT GATTGCCGGC GGCTTCAACG TGCTGGTGGT GCGCGAACTC 
ACCGGCGGGA TCTACTTCTC CCAGCCCAAG GGGATCGAGG GAGAGGGGCG TGAACGGGTC 
GGCTTCGACA CCCTGCGCTA CAGCGTGCCC GAGATCGAGC GCATCACCCA CGTGGCCTTC 
CAGGCCGCCC GGAAGCGGGG CAAGAAGGTC TGCTCCATCG ACAAGGCCAA CGTGCTCTCA 
TCGTCGGTGC TCTGGCGCGA GATCGTCACC ACCATCTCCA AGGAGTACCC GGACGTGGAG 
CTGTCCCACA TGTACGTGGA CAACGCTGCC ATGCAACTGG TCAAGTGGCC CAAGCAGTTC 
GACGTGATCC TGTGCGAGAA CATGTTCGGC GACATCCTCT CCGATGAGGC GGCCATGCTC 
ACCGGCTCCC TGGGCATGCT CCCCAGCGCC TCCCTGGCCG AGGGCTCCTT CGGCATGTAC 
GAGCCGTCCG GCGGTTCGGC ACCGGACATC GCCGGCCAGG GGATTGCAAA CCCCATCGCC 
CAGATTCTCT CCACCGCCAT GATGCTCAAG TTCTCCTTCG GCATGCTGGA GGCGGCCGAT 
GCCATCGACA GCGCCGTTGC AACGGTTCTG GAGCAGGGAT ACCGCACCCA TGACATCCAT 
CAGAACAAGC CGGGGGAGAA GCTGGTCAAC ACGAAAGAGA TGGGCGACGC GATTATCGCT 
GTGCTCTGA
 
Protein sequence
MSKSYKIAVL AGDGVGPEVM AEALRVLDCV EQKYGVTFQR TPANVGGAGI DNEGKALPES 
TVNICRASDA ILFGSVGGPK WENLPAEEQP ERGALLPLRK IFGLYANLRP AIIFPSLTGA 
SSLKEEVIAG GFNVLVVREL TGGIYFSQPK GIEGEGRERV GFDTLRYSVP EIERITHVAF 
QAARKRGKKV CSIDKANVLS SSVLWREIVT TISKEYPDVE LSHMYVDNAA MQLVKWPKQF 
DVILCENMFG DILSDEAAML TGSLGMLPSA SLAEGSFGMY EPSGGSAPDI AGQGIANPIA 
QILSTAMMLK FSFGMLEAAD AIDSAVATVL EQGYRTHDIH QNKPGEKLVN TKEMGDAIIA 
VL