Gene Ppro_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0030 
Symbol 
ID4573867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp34409 
End bp36010 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content61% 
IMG OID639754073 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_899728 
Protein GI118578478 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGACT GCCCGAACAT CCTCGAGGGG GATGAGGCCC TTCTTGCGTC CCGCCAGCGC 
CGCATCCTTG AAAAGTGTTG CGACTGCGCC AGTTTCAAGG ACGACCTGCG GCGTTTCCGC
GAGAGCGGTC ACCCCCTGGC TCCGGTCATC CTCACCCTGC ACGGCGCGCA CCAGCGCCAA
AAATCCCAGA TCGATTCCCT GGTCAGCTTC CTGGACAGCA AAACCCTGGA GGTGCGTTTC
CTCCACGAGC TTGGTTCTAC CCTGCAGAGT TCCGTGGACC TGGAGGAGGT GCTCTCCGTT
GCCCTGACCG CCATTACCGC CGGCAAGGGC TTCGGCATGA ACCGGGCCTT TCTGCTGATC
ATCAACCGTG AGCAGGGTCT CCTCCAGGGG CACCTGGCCA TCGGACCGCG CAGCTATGAA
GAGGCCAACC AGACCTGGGA CGAGATCTCC CGCAACGACA TGGACCTGCA GGGTCTGGCC
CAGAATTTCC GCGCCAACAA ACTCGACTCA GAACGGGCCA AGTTTCACGA TATCCTGGAG
CAGCTTACCG TTCCCCTGTC AAACAGCGAT CACCTGCTGA TCAGCACCTT GAACGGCACA
CAGCCGCTTT TGGTGGAAAA CGCCTTCCAC AACCCGGACA TCTCCACTGA AATCGCCAAC
CTCCTGGGGG TCGATACCTT CCTGCTGCTG CCGTTGATCA GCCGCAAACG CCGGGTGGGC
ATGATCATCA CCGACAACTG CATCACCCAC CGCCGGATCA GTGAAGAAGA CATGCGCTCC
ATCGAGAATT TTTCCTTTCT GGTGGCCTTT GCCATCGAGC GCGCCTCACT GTACGAACGG
CTCCAGGTGG AACTGAGCCG TGCCACCGAG GCGGGCAACA AACTGAAGGA ACAGCAGGAA
CTGATCGTCA GGATGGAGAA GATGGCACTG GTGGGGCGGA TCACCTCCAG CATCGCCCAC
TCCATCCATA ACCCGCTGAT GGTCATCGGC GGATTCGCAC GCTCCATCCT GAAGAGCACC
CCCGAGGCAG ACCCCAAGCG GGGCTTCATC GAATCCATCG TGGGGGAGGC TCGCCACCTG
GAGGACGTGC TGGACGAGAT CCTCAACTAC TCCGATTCGC TCTATCCCAC CAGGGATTTC
TGGGATGTGA ATCAGTTGCT GGAGGCATCC CTGCGGGAGA TCCAGGAGTT TCTCCTGGAA
CGCGACTGCA TCTGCCAGTT CGAGCCGCAG GAGGAACTCC CCCTGGCGTA CATCGACTTC
AAGCAGGTAG CCTACTGCGT GCGCACCCTG GTCATGGACA GCCTGGAGGG ACGCAGCGGA
GAACTGCTCT CCATGCGGGC CCTCCGGCAG GGTGACGGCA TCCATGTGGT CATCACGGAC
AGGGCGCGCA GCGTCACCCC AGAAGACCTT GATGCGCTCT TGACCCCCTT TGCCATCACC
CACACCATGG GATCGGGACT CGGCCTGGCG CTCTGCCGTA CCATGCTGGA AAAGCAGGAC
ATCCCCTTTA TCGTTGCCGC GCCTCCCGGA GGCGGGGTCA CCTTTACGAT CATACTTCCC
ACGGAAAAGG AGAGCAGCCA TGAGCAGGCT CCTGGTAGTT GA
 
Protein sequence
MGDCPNILEG DEALLASRQR RILEKCCDCA SFKDDLRRFR ESGHPLAPVI LTLHGAHQRQ 
KSQIDSLVSF LDSKTLEVRF LHELGSTLQS SVDLEEVLSV ALTAITAGKG FGMNRAFLLI
INREQGLLQG HLAIGPRSYE EANQTWDEIS RNDMDLQGLA QNFRANKLDS ERAKFHDILE
QLTVPLSNSD HLLISTLNGT QPLLVENAFH NPDISTEIAN LLGVDTFLLL PLISRKRRVG
MIITDNCITH RRISEEDMRS IENFSFLVAF AIERASLYER LQVELSRATE AGNKLKEQQE
LIVRMEKMAL VGRITSSIAH SIHNPLMVIG GFARSILKST PEADPKRGFI ESIVGEARHL
EDVLDEILNY SDSLYPTRDF WDVNQLLEAS LREIQEFLLE RDCICQFEPQ EELPLAYIDF
KQVAYCVRTL VMDSLEGRSG ELLSMRALRQ GDGIHVVITD RARSVTPEDL DALLTPFAIT
HTMGSGLGLA LCRTMLEKQD IPFIVAAPPG GGVTFTIILP TEKESSHEQA PGS