Gene Ppro_3849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_3849 
Symbol 
ID4571471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008608 
Strand
Start bp21809 
End bp22519 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content60% 
IMG OID639754035 
ProductABC transporter related 
Protein accessionYP_899690 
Protein GI118577451 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones132 
Plasmid unclonability p-value0.0574047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGCA AAGGCATTCG CATCGAAGGT TTGAGAAAAC GTTATGGCGA GGGGGATACC 
GCGGTCGATG CCTTGAAAGG CGTGGACATG CAGGTGGCAC CCGGCGAGGT GGTTGGCCTG
ATTGGCCCTT CCGGGTCCGG CAAGAGCACG CTGCTCAAAT GTCTGGGCGC AGTGATTGAT
CCGACCGCCG GGCGCATGAC GCTGGGTGAT GAAGTGATCT ACGACGATGG CTGGAAAGTC
CGCGACTTGC GCGCCTTGCG GCGCGACAAG ATCGGTTTCG TTTTCCAAGC ACCATACCTG
ATTCCGTTTC TCGATGTCAC CGACAACGTG GCGCTGCTGC CGATGCTTGC AGGCGTCGCG
AATGGAGAGT CGCGCGCGAA GGCACTGGAA TTGCTCACGG CGCTTGATGT GCAACACCGA
GCTCGCGCGA TGCCCTCGCA ACTCTCCGGT GGCGAGCAGC AACGGGTTGC CATCGCGCGC
GGATTGGTCA ATCGTCCCCC GGTGATCCTG GCCGATGAAC CCACTGCGCC GCTGGATTCC
GAGCGCGCCA TGGCTGTGAT CCGCATCCTC AATGACATGG CTCGGAAGTT CGAGACCGCC
ATCATCGTCG TCACCCATGA CGAAAAGATC ATCCCCACTT TCAAGCGCAT CTACCACATC
CGCGACGGTG TGACCCATGA GGAAGCTGGC GAAGGGCGGG AGTTCGAATG A
 
Protein sequence
MSGKGIRIEG LRKRYGEGDT AVDALKGVDM QVAPGEVVGL IGPSGSGKST LLKCLGAVID 
PTAGRMTLGD EVIYDDGWKV RDLRALRRDK IGFVFQAPYL IPFLDVTDNV ALLPMLAGVA
NGESRAKALE LLTALDVQHR ARAMPSQLSG GEQQRVAIAR GLVNRPPVIL ADEPTAPLDS
ERAMAVIRIL NDMARKFETA IIVVTHDEKI IPTFKRIYHI RDGVTHEEAG EGREFE