Gene Ppro_3712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_3712 
Symbol 
ID4571403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008607 
Strand
Start bp90634 
End bp91836 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content47% 
IMG OID639753901 
Producthypothetical protein 
Protein accessionYP_899556 
Protein GI118577316 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTCG CCATCCGGGA CATAAGATAT AACCTCGGTA GATTTATTCT GACCTCTATT 
GGCTTGGGCC TTCTCCTGGG AGTGGTCATA AGTATGGGGG GGATCTATCG TGGTTTGATA
GCAGACTCGC TGTCAATCCT CAATGTTAAC AAGGCGGATA TCTGGGTTGT TCAGCAGGGC
ACTAATGGTC CCTTTGCCGA GAGTTCGCGC ATTCCTGAGG AGATCAAATA CCGTATCGCC
GCTATTCCGG GAGTGTTGCA GGTAGCCCCG CTCGCATTTC AGACTATTCA GATAGAACGT
AATGCCAAAC CGTTTCGCTT TTTTTTGATG GGATACGACT TGAACAGCTT TGGCGGGCCG
CCGGAAATCA TTGCAGGACG TGATATCCGC CAGAAACATT ACGAAATGGT TGTTGCCGAA
GCGATGAAGA TGGCGCTCGG TGAAAAAATA CACCTGGGGA TTCATGACTA CACAGTGGTC
GGCATTACCG GGAAGATCGT TTCCTCAGGA GGCGATCCGG TTGCATATGT GAGTCTTGCA
GATGCGCAGG AAATTCAGTT CAAGCAAGAC AATAATGCCA CACGTAACAA CCGCGAAAAA
ATAGGCTCAC AAGTGAACGG AAACAAGACA CTTTCACCGA TTCAAAATCG GCTGATGAAA
CAGAGCATCG TTGACGTGAC CGAATCTACC CACACGATAA ATACGGTTAT AGCAAAACTC
TCTCCCGGCA AGGATTTGAA AGAGGTGCAG GAGCGGGTAT CGCGATGGAA TCATTATCGA
GCCATCTCCG ACGAAGAACA AACCAAAATA CTGTCCAAAG GCATGATAGA AAAAGCCAGG
ATGCAATTAG GGCTTTTCAG CATCATACTT CTTATCATTT CGTCTGTTAT CATCTCCCTG
ATCATCTATA CCTCGACCCT CGACAAGATC AGGGTCATTG CCACGCTGAA ACTTATCGGC
TCTCAGAACC GGGTAATAGT TGGCATGATT CTTCAGCAGT CATTGTTGAT GGGGATTCTT
GCCTACGGTA TCGGTTATGT GCTTATCCTG ATAACCAGTG AAAAATTTCC TCGCCGGGTC
GTTCTTGAAA CATTGGACCT GCAATCGCTT TTTATCATTG TCATAGCAAT ATGCACGATT
TCGAGCTTTG TAGGCATACG GAAGGCGCTT AGTGTCGAAC CGGCAGAAGC GTTGGGTGGT
TAA
 
Protein sequence
MNLAIRDIRY NLGRFILTSI GLGLLLGVVI SMGGIYRGLI ADSLSILNVN KADIWVVQQG 
TNGPFAESSR IPEEIKYRIA AIPGVLQVAP LAFQTIQIER NAKPFRFFLM GYDLNSFGGP
PEIIAGRDIR QKHYEMVVAE AMKMALGEKI HLGIHDYTVV GITGKIVSSG GDPVAYVSLA
DAQEIQFKQD NNATRNNREK IGSQVNGNKT LSPIQNRLMK QSIVDVTEST HTINTVIAKL
SPGKDLKEVQ ERVSRWNHYR AISDEEQTKI LSKGMIEKAR MQLGLFSIIL LIISSVIISL
IIYTSTLDKI RVIATLKLIG SQNRVIVGMI LQQSLLMGIL AYGIGYVLIL ITSEKFPRRV
VLETLDLQSL FIIVIAICTI SSFVGIRKAL SVEPAEALGG