| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1511 |
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| Symbol | fliA |
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| ID | 4539065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter fetus subsp. fetus 82-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008599 |
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| Strand | + |
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| Start bp | 1490190 |
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| End bp | 1490894 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639746870 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_892645 |
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| Protein GI | 118474443 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.805227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGAGT TAAAGCAAAA GCAGCTTGAC GCTTATCAAA AAGAGATAAA AAAAAGCCAA
GATGAACTCG TTTTATCATA TATGCCTGCT CTTAGAGCTA TGGCTTTTAG ACTTAAATCC
AGACTTCCTA GCTCCATAGA AGTAAATGAT CTAATAAGCG TAGGCGCTAC TGCTATGGTA
AAACTATCAA GAACATACGA TAAAGAGCAG AACGATAGCT TCTGGGGATA TGTAAAACAA
AGAGTTTATG GTTCTATGAT CGATTATTTA AGAGGTCTTG ATTTTCTTAG TAGAGGAAAT
AGAAAACTAG TAAAAGATAT AGACAACGCT ATAAACGAGT ATTTTAATAA ATTTGAGTGC
GAACCTGACG ATGCTTATTT AGCAAAGATT TTAGGTGAAG ATGAAGCAAA GATAAGAGAG
GCTAGAAATC TTAGTGATGT ATCCGCTACA TTCCCCATAG ATGAACAATC TCAGCTTCTT
AGCGAATCAG ATACCGAAAG CAAAATAGAA AAAGACGAAC TCATACAAAA GATCACGGAC
GTTTTAAACG AATTTGGCGA ACGAGAACAG ATGATAATAC AACTTTACTA CTATGAGGAA
CTAAGTTTAA AAGAGATTAG TGATATTTTA GGTATTACCG AATCTAGAAT TAGTCAAATT
CATAAAAGAC TCATTACAAA AATTAGAGAA AGGCTAGGCT TTTAA
|
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| Protein sequence | MNELKQKQLD AYQKEIKKSQ DELVLSYMPA LRAMAFRLKS RLPSSIEVND LISVGATAMV
KLSRTYDKEQ NDSFWGYVKQ RVYGSMIDYL RGLDFLSRGN RKLVKDIDNA INEYFNKFEC
EPDDAYLAKI LGEDEAKIRE ARNLSDVSAT FPIDEQSQLL SESDTESKIE KDELIQKITD
VLNEFGEREQ MIIQLYYYEE LSLKEISDIL GITESRISQI HKRLITKIRE RLGF
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