| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1319 |
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| Symbol | rplA |
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| ID | 4538083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter fetus subsp. fetus 82-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008599 |
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| Strand | - |
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| Start bp | 1311805 |
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| End bp | 1312509 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639746686 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_892471 |
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| Protein GI | 118474554 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000101939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAAAA AAGTTACTAA AAGATTTTCA GAGTTACTTA AAAAAGTAGA TTCTGATAAA
ATATATACTC TTGATGAAGC AGTAAGTACA GTTAAAACTT TAGCTTCTGC TAAATTTGAT
GAAACAGTCG AAATAGCTCT TAAACTCAAT GTTGATCCAA GACATGCAGA TCAGATGGTT
AGAGGCTCAG TTGTGCTTCC GGCTGGTACT GGTAAAACTG TAAGAGTAGC AGTTATAGCT
AAAGATGCTA AAGCGGATGA GGCAAAGGCT GCTGGGGCCG ATATAGTCGG TGCTGAAGAT
TTTGTAGATG AGATAGCAAA AGGCGTTATA AATTTTGATG TTCTTATAGC TACACCAAAT
TTAATGGGAT TAGTAGGTAA AATAGGTCGT TTGCTTGGAC CAAAAGGTCT TATGCCAAAT
CCAAAAACCG GTACAGTTAC AATGGATGTT GCTCAAGCTA TAAAAAATGC AAAAGGCGGA
CAAGTAAATT TCCGTGTTGA TAAACAAGGA AATATACATG CTGGACTTGG CAAGGTAAGC
TTTAGCAAAG ATCAGCTAAA TGACAATATA TCAGCTTTTA TTAAGATGAT AAATAAACAT
AAACCAGCAG CTTCAAAAGG TAGATATATC AAATCTGCTG CGTTGTCATT AACAATGAGT
CCATCAATAA CTCTTGAGCC ACAAGAGCTT ATGGATCTTA AATAA
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| Protein sequence | MSKKVTKRFS ELLKKVDSDK IYTLDEAVST VKTLASAKFD ETVEIALKLN VDPRHADQMV
RGSVVLPAGT GKTVRVAVIA KDAKADEAKA AGADIVGAED FVDEIAKGVI NFDVLIATPN
LMGLVGKIGR LLGPKGLMPN PKTGTVTMDV AQAIKNAKGG QVNFRVDKQG NIHAGLGKVS
FSKDQLNDNI SAFIKMINKH KPAASKGRYI KSAALSLTMS PSITLEPQEL MDLK
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