Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_1082 |
Symbol | |
ID | 4538696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | + |
Start bp | 1079862 |
End bp | 1081604 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 639746455 |
Product | threonine synthase |
Protein accession | YP_892243 |
Protein GI | 118474583 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0498] Threonine synthase [COG1324] Uncharacterized protein involved in tolerance to divalent cations |
TIGRFAM ID | [TIGR00260] threonine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000183977 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGTAT TAAGTACAAC ACCAGATGAA AAAATAGCAA ATAAGTTGGC TAAAGAGTTA GTAGATAAAA AAGCTGCGGC TTGTGTGAAT TGTATAAAAG ATCTGAAAAG CTTTTATACT TGGAAAAATG AAGTACAAAA CGACTCTGAA GTTCTTATGA TGATAAAAGG AAATTATAAG AAAATAAAAG ATGTTATTTT AAAAAATCAC CCTTATGAAA CACCGGAAGT CATAGCTATA AAACCTAAAA AAATAGAAAA AAGCTATAAA AAATGGTTAG AAAAAAGTAC AAAAATATCA CCTATGTTAG TAGGTACAAG GTTAAATAAC AACGAAGAAG TTTCTTGCGT TAGTTTAAGC GAAGCTTTAT TGCAACCAGC AGCAAAACAT GGCGGACTTT ACGCGCCTAT AAATTTACCT ATTTTGGATG ATAACTTTTT TAAAAAAGCA TCTAAATTAA AGTATGATGA GATAGCTATG ATGGTTATTA AAAAGTTTAA ATTTGATATA GACAAAGATA TTTTTAAAAA AGCATTAAAA AGATACGCTA AATTTGATAA AGAAGCAGTG GAAATAAAAA AATTAAATAA AAATTTATAT ATAAATGAGT TATGGCACGG ACCTACAAGA GCATTTAAAG ATATGGCGCT TCAGCCTTTT GGTGTAATTT TAAAAGAGCT TGCCAAACAA AATAATAAAA AATATCTCAT TATGTGTGCA ACAAGCGGCG ATACCGGACC TGCCACACTG AATACATTTA GCGATGTTCA AAATATAAAA GTCGTATGCA TATATCCAAA AGACGGCACA AGCGAAGTTC AACGCTTACA AATGGTAAAT CAAAAAGGTA AAAATTTGAA ATCCATAGGG ATAAAAGGTA ATTTTGATGA TGCTCAAAAA GCCTTAAAAG CGCTATTAAA CGATAAATCT TTTAAAAATG AGCTATCAAA TTTGGGGCTT AACTTAAGTG CTGCGAATTC TGTTAATTTC GGCAGAATTT TATTTCAGAT TATTTATCAT ATCTATGTTT GTATAAAAAT AAACAGTAAT AAAAAACCGA TAGATATCGT TGTTCCAAGC GGCAACTTCG GTAATACTTT AGGGGCGTAT TACGCTAAAA AAATGGGTGC AAATATAGGA AAAATAAAAA TTGCTTCGAA CGCGAACAAT ATATTAACGG AACTTTTCAC AACAGGAATT TATAATCTGC AAGATAAAAA ATTAATTCAA ACTATAAGCC CTGCTATGGA TATACTAATT AGCTCAAATG TCGAAAGACT TTTGTTTGAT AAGTTTGGAA GTATTAGAAC AAAAGAGCTT ATGGATAGTT TGAAAAACAG TGGATTTTAT AAACTCGCTC AAGAAGAACT TGAGGAGCTA AAAGCAGATT TTGAAGCAGA TTTTTGTAGC GATGAAGAGT GTGAAAATTA TATAAAAAAC GTTTCAAGCA AAGGTATTTT GATAGATCCT CATACGGCAA CTTGCCTAAA ACTAGTTGAC AATGATAAAC TTAGCGTGAT AACATCTACA GCTCAATGGG TAAAATTTAC TCCAAGCATG GTAAAAGCTA TCAAAAATAA ACCTACACAA GATGAATTAG TAGATATGAA AGAGCTTGCA AAAGAGTTTG ACGTAAAAAT TCCAAAGTCC ATCTTAGAGT TATTTTCACA AAAAGAGCTT CATAAAGACG TTATAGAACA AGATAAGATA AAATCAAACA TCATAAATTG GCTTAAAAAA TGA
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Protein sequence | MIVLSTTPDE KIANKLAKEL VDKKAAACVN CIKDLKSFYT WKNEVQNDSE VLMMIKGNYK KIKDVILKNH PYETPEVIAI KPKKIEKSYK KWLEKSTKIS PMLVGTRLNN NEEVSCVSLS EALLQPAAKH GGLYAPINLP ILDDNFFKKA SKLKYDEIAM MVIKKFKFDI DKDIFKKALK RYAKFDKEAV EIKKLNKNLY INELWHGPTR AFKDMALQPF GVILKELAKQ NNKKYLIMCA TSGDTGPATL NTFSDVQNIK VVCIYPKDGT SEVQRLQMVN QKGKNLKSIG IKGNFDDAQK ALKALLNDKS FKNELSNLGL NLSAANSVNF GRILFQIIYH IYVCIKINSN KKPIDIVVPS GNFGNTLGAY YAKKMGANIG KIKIASNANN ILTELFTTGI YNLQDKKLIQ TISPAMDILI SSNVERLLFD KFGSIRTKEL MDSLKNSGFY KLAQEELEEL KADFEADFCS DEECENYIKN VSSKGILIDP HTATCLKLVD NDKLSVITST AQWVKFTPSM VKAIKNKPTQ DELVDMKELA KEFDVKIPKS ILELFSQKEL HKDVIEQDKI KSNIINWLKK
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