| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1032 |
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| Symbol | |
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| ID | 4538322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter fetus subsp. fetus 82-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008599 |
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| Strand | + |
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| Start bp | 1033875 |
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| End bp | 1035812 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639746407 |
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| Product | penicillin-binding protein 1A (PBP-1a) (PBP1a) |
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| Protein accession | YP_892196 |
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| Protein GI | 118474121 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00344643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCATA TTTTTGGCTT TTTTACTATA ATTGCAATTG CGATATTTGC AGCTCTTATA
TATTTTTACT CACAAATCAG AGTAGATATA TCTGCCATAG TAGAGTATAA ACCAAAACTA
ACAACTCAAA TTTTTGACAG AAATGGAGAC CTTGTAGCTA ATGTTTTTGA CGAAGAAAAT
AGACAATATG CAAAATATCA AGAGATACCT CCAAGAGTTG TCGAAGCATT AGTCGCAGTT
GAAGATACAA GCTTTTTTGA GCATGGAGGT ATAAATGTAG AAGCTATTTT TAGAGCAGCC
ATAAAAGATA TAAAAGCAAT GTCATTAGTA GAAGGAGCCT CCACTTTAAC TCAACAACTG
ATAAAAAATA TGGTTCTAAC ACGCGATAAA AAATTTACTC GTAAATTAAA AGAGGTTATT
TTAGCATTCA AGATAGAAGA AGATCTGACC AAAGAAGAAA TTATCGAAAG ATATCTCAAT
CAAGTATATT TTGGACACGG CTATTATGGT ATAAAAACAG CAGCACTCGG ATATTTTAAA
AAAGAGTTAA ATGAACTTAC TATAAAAGAG ACTGCTATAC TAGTAGGACT CCCAAAAGCA
CCTAGTAACT ATGATCCTAC TAGACACATA GATCTATCTT TGTCACGTGC TAATGGAGTT
ATTACAAGAC TGTATGCATT AGGCTGGATA AGTGAAAACG AATACGCTCA GGCCTTAAAA
GAAACTCCTG TAGTATATGA TGAGACATTA ACACAAAACA GGGCTCCGTA TCTAGTAGAT
GAAACATTAA AAGAAGCTTA TAAAATATTT CCGGATATAA AATACGGTGG ATATAAAATC
ACATTAAATG CCGATCTCAA AGTACAAGAA ATAGCGCAAA ATGCGCTTAA ATTTGGATAT
AACGAGATAT TAAAAAGAGA TAAAAATGCA GATCAAAATT ATCTAAACGG CGCTATGATA
GTAACTAATC CTGCAAATGG TGAAATACTA GCATTAGTCG GAGGTATCGA CTACGCAAAA
AGTAACTTCA ACCGTGCCAC GCAAAGTGAG CGCCAACCAG GATCTAGCTT CAAGCCATTC
ATATACCAAA TCGCTCTTGA TCTTGGCTAC TCTCCTATGA GTAAAGTAGC AGATATATCA
AGAGTATTTG AAAATGTAAA TAGAAGCGAA GAGGATAAAG ACTGGAAACC AAAAAATTAT
GGTGGAAATT TTGAAGGATA CATAACTCTT AAACATGCTT TAAGACAGTC TCGTAATTTA
GCCACCATAA ATCTTTTAAA TTCTATAGGA TTAGACGTAG TTCAGCAAAA ACTTTCATAT
TTTGGTTTTA ATAATATACC TCAAAATCTT TCAATAGCAC TTGGAAGTTT TGGAGTAAGC
CTTATAAACT TTAGCGAATA TTACTCAATG TTCGCAGGTT TAGGAGAGCA GAGCAAATCA
AGGCTAATAA AATCCATCGA AAGCACAAAC GGCACATTAA CAACATATGA GCAAGAAAGT
TCTAAAATCA TAGATCCTCA GCAGGCGTAT TTAATGATAG ATATGCTAAA AGATGTCGTA
AATGCCGGAA CCGGGCGAAA TGCAAAAGTT GAAGGTATAG AAGTAGCAGG AAAGACAGGA
ACTACAAATA ATAACGTAGA TGCGTGGTTT TGCGGATTTA CTCCTGAAGT CCAAGCCATT
ATCTGGTATG GAAACGATAA TAATCTACCT ATGAGAAAAA TAGAAGGTGG CGGAAGAACC
GCAGCTCCTG TATTCAAGGA GTTTATGACA AATTATATAG AAGCATTTCC TCAAACTAAA
CGTAAATTTG AAACCCCAAA TGGAGTATAT CATAAAATTT ATGAAGGCAT AGATGAAATA
TATACAAGTA CTTCTCCACT GCCTTCACAA AAAACAGATG CAATCTCTAC TCAAGAGAGC
GATGGGTTAA TATTTTAA
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| Protein sequence | MKHIFGFFTI IAIAIFAALI YFYSQIRVDI SAIVEYKPKL TTQIFDRNGD LVANVFDEEN
RQYAKYQEIP PRVVEALVAV EDTSFFEHGG INVEAIFRAA IKDIKAMSLV EGASTLTQQL
IKNMVLTRDK KFTRKLKEVI LAFKIEEDLT KEEIIERYLN QVYFGHGYYG IKTAALGYFK
KELNELTIKE TAILVGLPKA PSNYDPTRHI DLSLSRANGV ITRLYALGWI SENEYAQALK
ETPVVYDETL TQNRAPYLVD ETLKEAYKIF PDIKYGGYKI TLNADLKVQE IAQNALKFGY
NEILKRDKNA DQNYLNGAMI VTNPANGEIL ALVGGIDYAK SNFNRATQSE RQPGSSFKPF
IYQIALDLGY SPMSKVADIS RVFENVNRSE EDKDWKPKNY GGNFEGYITL KHALRQSRNL
ATINLLNSIG LDVVQQKLSY FGFNNIPQNL SIALGSFGVS LINFSEYYSM FAGLGEQSKS
RLIKSIESTN GTLTTYEQES SKIIDPQQAY LMIDMLKDVV NAGTGRNAKV EGIEVAGKTG
TTNNNVDAWF CGFTPEVQAI IWYGNDNNLP MRKIEGGGRT AAPVFKEFMT NYIEAFPQTK
RKFETPNGVY HKIYEGIDEI YTSTSPLPSQ KTDAISTQES DGLIF
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