| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0988 |
|---|
| Symbol | |
|---|
| ID | 4538593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | - |
|---|
| Start bp | 992013 |
|---|
| End bp | 993218 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 639746367 |
|---|
| Product | type I restriction-modification system, S subunit |
|---|
| Protein accession | YP_892156 |
|---|
| Protein GI | 118474615 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.271922 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATA GCTACAAACA AACAGCCGTG GGACGCATCC CGAAAGAGTG GGAAGTTGTT
AGGTTGGGAG ATGTTTTTCA GCGAGTTACT AGAAAAAATA CCGTCAATAG CGATAATGTT
CTTACAATAT CGGCTCAAAA CGGTCTGATA AAACAAGAAA ATTTTTTTAC AAAAAGTGTT
GCAAGTAAAG ATTTGAGTAA TTATATCTTG TTAGAAAAAG GAGAATTTGC CTATAATAAA
AGCTACTCTA GCGGATATCC AATGGGGGCA ACGAAGCGTT TAAACTTCTA TAATTATGGC
GTGTTATCAA ATTTATACAT ATATTTTAAA ATCAAAAATG GAAATAGCGA TTTTTACGAG
CAGTATTTTG AAGCCGGACT CTTAAACAAA GAAATACATC AAATTGCACA AGAAGGAGCT
AGAAATCACG GATTATTAAA TATATCTGTT GTTGATTTTT TTAATATTTT AATAGTGCTT
CCACCACTAA AAGAGCAAGA AAAAATAGCG GAAATTCTAT CTACTTGCGA TAAAGTTATA
TCAAATTTAG ATGAATTAAT AAAGGCTAAA ACAAATCTTA AAACAGCCCT AATGCAAAAT
CTACTCTCCG CTAAAATCCG CTTCAAAGAA TTCACCGACC CTTGGCAAGA AAAATTTGGG
GATAAACTTT TTAAAACTAT AACTGAAATA AATCAAAACT ACGATTTGCC TATTCTAGCA
ATTTCGCAAG AATTTGGTGC AATACCAAGA AATTTAATTG ATTACAAAGT TATTGTTTCT
TATAAAAGTA TTTCAAATTA TAAAGTTGTT AGAAAAGGAA ATTTTATTAT AAGCCTTAGG
TCTTTTCAAG GCGGAATAGA ATATTCTAAA TATGATGGAA TTTGCAGTCC AGCTTATATT
ATTTTAAAGC CAATCCAACA AATTTTCGAT AATTTTTTTA AATACTATTT CAAAAGTCAC
GATTATATTC AAAAACTAAA TTCAAAACTT GAAGGCATAA GAGACGGTAA AATGGTAAGT
TTTAAACAAT TTTCTGAAAT TAAAATCCCA TTACCAAATT TAGCCGAGCA ACAAAAAATC
GCAGAAGTGT TATCGGCGTG TGATGATGAG ATAAATTTAC TCAAAGATAA GTTATCGAAT
TTAAAGCTCC AAAAGCAGGG CTTAATGCAA AATCTACTAA CAGGAAAGGT CAGGGTAAGG
GTATGA
|
|---|
| Protein sequence | MSNSYKQTAV GRIPKEWEVV RLGDVFQRVT RKNTVNSDNV LTISAQNGLI KQENFFTKSV
ASKDLSNYIL LEKGEFAYNK SYSSGYPMGA TKRLNFYNYG VLSNLYIYFK IKNGNSDFYE
QYFEAGLLNK EIHQIAQEGA RNHGLLNISV VDFFNILIVL PPLKEQEKIA EILSTCDKVI
SNLDELIKAK TNLKTALMQN LLSAKIRFKE FTDPWQEKFG DKLFKTITEI NQNYDLPILA
ISQEFGAIPR NLIDYKVIVS YKSISNYKVV RKGNFIISLR SFQGGIEYSK YDGICSPAYI
ILKPIQQIFD NFFKYYFKSH DYIQKLNSKL EGIRDGKMVS FKQFSEIKIP LPNLAEQQKI
AEVLSACDDE INLLKDKLSN LKLQKQGLMQ NLLTGKVRVR V
|
|---|
| |