Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0980 |
Symbol | tgt |
ID | 4537752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | + |
Start bp | 982305 |
End bp | 983429 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639746359 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_892148 |
Protein GI | 118474179 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTA AAATAGATAA AACAGACGGC AACGCCAGAG CTTGCACTTT GCAAACAGCT CATTCGACGA TCCAAACTCC TATTTTTATG CCTGTCGGAA CACTTGGAGC GGTTAAAAGC TTGGATGCCA TAGATTTAAA AGAAATTTTA GATGCAAAAA TAATACTAGC AAACACCTAT CATTTATATT TACGGCCAAC AAGTAAGGTT GTAAGGGAGT TTGGCGGATT GCACGGTTTT AGTAAATTTG ATAGAAGTTT TTTAACAGAC AGCGGTGGAT TTCAAGCATT TTCACTATCA AAAATTTCAA AACCGGATGA AAACGGGATC AAATTTAAAA GCCATATAGA TGGCAGTATG CACTATTTTA CACCTAAAAG TGTACTTGAT ACTCAGTATG ATTTGAGTAG CGATATCATG ATGATACTTG ATGATCTTGT AGCGCTCCCT GCTACTAAAG AAAGAATTGA TCTCAGCATA AAAAGGACGA TAAACTGGGC GAAAATAGCG TGTGAATATC ACAAATCAAA CAAACAAAAA AGCGTGGGGA TAGATCAAAA TATCTTTGGG ATCATTCAAG GCGGAACCGA CTATAATGCG CGCAAACTCT GCGCCGAGGC ACTTTGCGAG ATGGAGTTTG ACGGACTTGC TATAGGCGGA CTAAGCGTCG GAGAGAGCAA TGAAGAGATG TATGACACGG TTGAAGCCCT TATGCCATTC ATAGACAAAA ATCGCCCGCG CTACTTAATG GGCGTGGGAA CTCCTGAGGA TTTAGTACAA AACGTGGAGC GAGGCGTAGA TATGTTTGAT TGCGTTATGC CCACTAGAAA CGCGCGTAAC GGTACGCTTT TTACTAGTTT CGGGAAGATA AACATAAAAT CTGCAGCGTT TATCAAAGAC GATAACAAGA TCGATCCTGA ATGCGACTGC TATACTTGCT CTAACTTTAG CCGCGGATAC TTAAATCACC TTTATAAAGC TAGAGAACTT ACGTTTTTTA GGCTTGCAAG TCTTCATAAT CTGCATTATT ATCTAAATTT AGTAAAACAG ATGAGAGAAG CGATAATGCA AGGTAAATTT AAAGAATTTA AAAGAGAATT CTACGCAAAA AGAGGCATGA TATGA
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Protein sequence | MNFKIDKTDG NARACTLQTA HSTIQTPIFM PVGTLGAVKS LDAIDLKEIL DAKIILANTY HLYLRPTSKV VREFGGLHGF SKFDRSFLTD SGGFQAFSLS KISKPDENGI KFKSHIDGSM HYFTPKSVLD TQYDLSSDIM MILDDLVALP ATKERIDLSI KRTINWAKIA CEYHKSNKQK SVGIDQNIFG IIQGGTDYNA RKLCAEALCE MEFDGLAIGG LSVGESNEEM YDTVEALMPF IDKNRPRYLM GVGTPEDLVQ NVERGVDMFD CVMPTRNARN GTLFTSFGKI NIKSAAFIKD DNKIDPECDC YTCSNFSRGY LNHLYKAREL TFFRLASLHN LHYYLNLVKQ MREAIMQGKF KEFKREFYAK RGMI
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