Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0969 |
Symbol | thiD |
ID | 4538938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 971799 |
End bp | 972590 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639746348 |
Product | phosphomethylpyrimidine kinase |
Protein accession | YP_892137 |
Protein GI | 118474916 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.922433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAAAAAA TTTTAACCAT AGCAGGTTCT GATTGCAGTG GAGGAGCTGG CATACAAGCA GACATCAAAA CTATAACTGC TCATAAAATG TATGCAATGA GCGTTATCAC AGCTCTTACT GCACAAAATA CAATGGGTGT TTATGGTGTT CATGAAGCTC CTAGTGAGTT TGTTAAAGCT CAAATAGACG CTTGTTTTAA AGATATCGTT CCAAATGCAG TTAAAATCGG TATGGTATCA AACTCATATA TAATAAAAGC TATAGCAGCA AAATTAAAAG AGTATAACGC TAAAAATATA GTTATAGATC CGGTTATGGT AGCTACTAGC GGTGGTAAAT TAATGCAAGA TAGCGCCATA GAAGATGCTA TAAGCGAGCT GTTTTGTCTA GCCGACATTA TAACGCCAAA TATAGCCGAA GCCGAGATTT TAAGCGATAT AAAGATAATA GGCATACATC ATATGAAAGA AGCTGCTTTA AAGATATCAC AACTTACAGG CGGAGCGGTT TTAGTAAAAG GCGGGCATCT AAGAGATGAT GCAAGCGATG TTTTGTATTA CAACGGCAAA TTTGAGGTGC TAAGCGAAGA AAGAGTTCAT ACAAACGATA CTCACGGTAC TGGTTGCACT CTTTCAAGTG CTATAGCATG TGCTTTAGGA GCAAATAAAG ATATGTATTA TGCAGTCAAA AGCGCCAAAA AATTCGTCAC AACTGCTTTA AAAGGGGACT TAAAAATAGG CAACGGTAAT GGCGCGATAG ATCATTATTT CAGGATACCT GAGATTTTTT GA
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Protein sequence | MQKILTIAGS DCSGGAGIQA DIKTITAHKM YAMSVITALT AQNTMGVYGV HEAPSEFVKA QIDACFKDIV PNAVKIGMVS NSYIIKAIAA KLKEYNAKNI VIDPVMVATS GGKLMQDSAI EDAISELFCL ADIITPNIAE AEILSDIKII GIHHMKEAAL KISQLTGGAV LVKGGHLRDD ASDVLYYNGK FEVLSEERVH TNDTHGTGCT LSSAIACALG ANKDMYYAVK SAKKFVTTAL KGDLKIGNGN GAIDHYFRIP EIF
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