| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0764 |
|---|
| Symbol | |
|---|
| ID | 4538154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | - |
|---|
| Start bp | 776425 |
|---|
| End bp | 777840 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 639746150 |
|---|
| Product | peptidase S1C, Do |
|---|
| Protein accession | YP_891939 |
|---|
| Protein GI | 118475548 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000251476 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAC TAACGATTAT TTCTATAATA ACAGCCGCAA GTCTATTTGG CGCAGATGTT
AAATTTAGTG ATGCAAATAA CAACTACGCA AGAGTAAATC CAAGTGCAGA TGCAAATACT
GTTTTATCAT ATCACAGCTC TATAGAAAAA GCTAAAAAAT CTGTAGTAAA TATATCAACA
TCGAAAACTA TAAAAGTAAA AAACAATCTA AATAGTCTAA TGGACGATCC GTTTTTTAAA
GAATTTTTTG GATTTAACTT CAAAACTCCA AAAGAAAGAA GTCAAAAAGC AACGTCTTTA
GGATCCGGAG TAATCATCTC AAACGATGGA TATATAGTCA CAAACTATCA TGTAGTCGAA
GATAGCGATG AGATCATAGT AACATTGCTT GATAATTCAA AAGAGTATAA AGCAAAAGTA
GTCGGCATAG ATCCAAAAAC AGATCTTGCT ATTATAAAAA TAGATGCTAA AAACTTTCAA
GCTATAAGTT TTGCCGATAG TTCAAAACTT CTTGAAGGAG ACCTTGTATT TGCTATAGGA
AATCCATTTG GCGTAGGCGG AAGTATAACA AGCGGAATTA TTTCAGGGTT GAATAAAGAT
AATATAGGAT TAAACCAATA TGAAGATTTC ATACAAACAG ACGCTAGCAT AAATCCGGGA
AATAGCGGTG GAGCGCTGGT AGATAGCAGA GGAGCATTAG TCGGTATAAA CTCTGCCATT
CTTAGCAGAA GCGGCGGAAA TAACGGCATT GGGTTTGCTA TTCCATCGAA TATGGTAAAA
ACAATAGCGC AAAAACTAAT CTCAGATGGA AAAATCACAC GCGGATATAT AGGCGTTATG
ATATCAAATT TAACCGATGA TCAAAAAGAA ATTTATACAA ACAAAGAAGG TGCTTTAGTA
ACAAACGTAG AAAAAGATAA ACCAGCCGAC ATAGCAGGTC TTAAAAGAGG AGACCTTATA
ATAAAAGTTG GAAATCAAAC GATAAAAAAC GCAAATGATC TAAAAAATCT CATAGGATCA
TTAGAACCGA ACAAAGAGAT AAAAATAACG TTTGAAAGAT CAAATCAGAT AAAAGATACA
ACATTAAAAC TAGCAAATAT GGACTCAGGC TATATAGATC CAAAAGATGC GTACTTAACA
GACGGACTTA GTTTACAAAA TTTAAGCGAT GAAATAAGAT ATAAATTCCA AATTCCAAAA
GATATAAAAG GAATCATAAT TACAAATGTT AAAGATGATT CAAATGCTGC AAATGCAGGC
TTTGAAGCAG GAGATATAAT CGTTCAAGTG AATGAAAAAA TAATATATAA CGTAGATGAT
TTCACAAAAG AGATAAAATC AAGCAAAGCT CAAAACAAAA AACCTATCAT TTGGATAAAC
AGAAGCGGCG TATTGATGGG ATTAGTACTA AAATAA
|
|---|
| Protein sequence | MNKLTIISII TAASLFGADV KFSDANNNYA RVNPSADANT VLSYHSSIEK AKKSVVNIST
SKTIKVKNNL NSLMDDPFFK EFFGFNFKTP KERSQKATSL GSGVIISNDG YIVTNYHVVE
DSDEIIVTLL DNSKEYKAKV VGIDPKTDLA IIKIDAKNFQ AISFADSSKL LEGDLVFAIG
NPFGVGGSIT SGIISGLNKD NIGLNQYEDF IQTDASINPG NSGGALVDSR GALVGINSAI
LSRSGGNNGI GFAIPSNMVK TIAQKLISDG KITRGYIGVM ISNLTDDQKE IYTNKEGALV
TNVEKDKPAD IAGLKRGDLI IKVGNQTIKN ANDLKNLIGS LEPNKEIKIT FERSNQIKDT
TLKLANMDSG YIDPKDAYLT DGLSLQNLSD EIRYKFQIPK DIKGIIITNV KDDSNAANAG
FEAGDIIVQV NEKIIYNVDD FTKEIKSSKA QNKKPIIWIN RSGVLMGLVL K
|
|---|
| |