| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0606 |
|---|
| Symbol | |
|---|
| ID | 4538703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | + |
|---|
| Start bp | 611374 |
|---|
| End bp | 612531 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 639745992 |
|---|
| Product | GGDEF family protein |
|---|
| Protein accession | YP_891782 |
|---|
| Protein GI | 118474590 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2703] Hemerythrin
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR02481] hemerythrin-like metal-binding domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.369805 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTATA ATAAGTCTAT ATTTGCCTGG AGTAAAAAAT TCGAAACAAA CTTAGATAAA
ATAGACGATC AACATCATCA TTTAGTCAAT CTTATAAATA ATTTAAGTAA AAAACTTTCA
AATAGCAATC TGAGCAAAAA TGAATTAATA GGGCTATTTA CTGAGCTTTT TGGCTATGCT
AAATACCATT TTCACGATGA AGAGCAGCTT ATGGCGGAAA ATAAGCTTAA TTCCGAGTTT
GTAAAAGATC ATGTATTTAA TCATAAATTG TTTATAGAAG AAGTTGGAAT TTTATTTGCA
GGATTGCAAA GCGATGATGA AGATGATCAA GAAAATTTAG ATAAAACGGC TAAATATATT
TTAAATTTTT TAATTAATTG GCTTGCTTTT CACATTCTTG GACAAGATAA AAAAATGGCT
AGACAGATTG AAATGGTGAA AAGCGGTATT GCTTCTAAAA AAGCTTATAA TATGGTACGA
AATAAAGCTT CAGCAGAAGA AATCCAGCCT CTTGTAAGAA CTTTAAATAA ACTTTTAGAA
ATGATGTCTA AACGAAACAA AGACTTAGTA ATAGTAAATA ATGAACTACT TGAGTTAAAA
AAAGATCTTG AAAATAAAGT ACAAGATAGA ACAAAAGAGC TTATCGAAGC AAATGAAAAT
TTAGAAAAGC TTTCTATGAC AGATCAGCTT ACAGAGATGC CAAATAGACG CCACGCTATG
AAAACCCTTG ATTTGTTATG GAAAGAGAAT TTAGATAGCG ATAGAGGTTT GTCTGTTTTG
ATGATAGATT TGGATTATTT TAAAGAAGTA AATGATAATT ACGGTCATGA TGCGGGGGAT
TATATATTAA GATTAGTAGC TAGAACTCTT AAAGAGTCGG TTCGTACTGA TGATATAGTT
TGCAGACTCG GCGGAGATGA GTTTTTAGTG ATTTGTCCAA ATACTATGCT AGAAGGCTCT
ATTCAAGTTG CAAATAATCT GCTAAAAGAT ATACACAGTT TAAAAGTCAA AACTAAAAAC
TGTGAGTGGA ACGGAAGCGC TAGTATCGGA TTGGCCTGTA TGTCTCCTGA TATAAAAAAT
TATAGCAAAC TTATAAAACT TGCCGATGAT AAAGTATATG AAGCAAAACA GTCGGGTAAA
AACTGTTTTA TGTATTAA
|
|---|
| Protein sequence | MDYNKSIFAW SKKFETNLDK IDDQHHHLVN LINNLSKKLS NSNLSKNELI GLFTELFGYA
KYHFHDEEQL MAENKLNSEF VKDHVFNHKL FIEEVGILFA GLQSDDEDDQ ENLDKTAKYI
LNFLINWLAF HILGQDKKMA RQIEMVKSGI ASKKAYNMVR NKASAEEIQP LVRTLNKLLE
MMSKRNKDLV IVNNELLELK KDLENKVQDR TKELIEANEN LEKLSMTDQL TEMPNRRHAM
KTLDLLWKEN LDSDRGLSVL MIDLDYFKEV NDNYGHDAGD YILRLVARTL KESVRTDDIV
CRLGGDEFLV ICPNTMLEGS IQVANNLLKD IHSLKVKTKN CEWNGSASIG LACMSPDIKN
YSKLIKLADD KVYEAKQSGK NCFMY
|
|---|
| |