Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0494 |
Symbol | |
ID | 4538478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 496461 |
End bp | 497645 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 639745881 |
Product | ABC transporter |
Protein accession | YP_891688 |
Protein GI | 118475370 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.491328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAATGCTG TTTTGGAAGT AAAAAACCTC ACAAAAATAT TTAAAATTTA TAAAAATGAT TTTCAAAGAT TAAAAGAGGC ATTTTTAAAG AAAAAATATC ATAAAGAACT GGTAGCAAAC GACAATATAT CTTTTAGTTT AAAAGAAGGG GAAAGTCTAG GTATAATTGG CTTAAACGGC GCTGGTAAAA GTACTCTTTT AAAGCAAATA GCAGGCGTAT TAGAGCCATC TAGCGGAGAG ATAATAAAAT TTAGTAAAGT AGCTGCTATT TTAGAGTTAG GAACAGGCTT TGATCCAGAG TTAAGCGGCA GAGAAAATAT ATATTTTAAT GGTTTTTTAC TCGGTATGCA AAAAGATCAT ATAGATAAAA TTTATAATGA GATTGTAGAT TTTAGCGAAT TGATAAATTT TATAAATATG CCAATTAAAT CATACTCGTC TGGCATGATC GTAAGGCTAG CATTTAGCAT AGCCGTATTT AGCGATGCTA AGATTTTTAT TATAGATGAA GCCTTATCTG TAGGAGATGC GCATTTTTCT CAAAAATGTA TAACAAAACT AAATGAGATA AAACAGAACG GTACAAGTAT AATATTTGTT TCCCATGATC TAGCTGCGTT AAAACTGCTT TGCCAAAGGA TAATTTTACT AAAAGAAGGT AAACTTATTG GTGATGGAGA AGCTTCTGCT ATATTACAAG AATACAACTA CCTTATATCG AAACAAAGCG AACAAAACAG TGAGTATGAA AACGGATATG GAGACAAATC AGCAGAAGTT TTAGAAGCAT ACATATTAAA AAACGATAAG CCATCAAAAG TATTTTTTAG CGGCGATGAA GCTACTATAT GTATAAAAAT AAAAGCAAAC AAAGACTTAA ATGATTTAGT AGTAGGTTTT CTTATAAAAG ATAAATTTTC TCAAGATATA TTTGGCACAA ACTCAAACAT AATAAATCAC CCTATTGCAG TGAAAAAGGA TAAAATATAT TTAATATCAT ACATATTAAA TTTAAACATA GGAAACGCAT TTTACACAAT GTCGCTAGCA CTACATCAGA GCAATACTCA TATAGATATT TGTCATCACT GGTTAGATAA CTATTTAAGT TTTCAAGTTA TCTCAGATCC AACATTTATA GGCATATCAA AATTATATCC AACAATACAA ATTAAGGAAA TATAA
|
Protein sequence | MNAVLEVKNL TKIFKIYKND FQRLKEAFLK KKYHKELVAN DNISFSLKEG ESLGIIGLNG AGKSTLLKQI AGVLEPSSGE IIKFSKVAAI LELGTGFDPE LSGRENIYFN GFLLGMQKDH IDKIYNEIVD FSELINFINM PIKSYSSGMI VRLAFSIAVF SDAKIFIIDE ALSVGDAHFS QKCITKLNEI KQNGTSIIFV SHDLAALKLL CQRIILLKEG KLIGDGEASA ILQEYNYLIS KQSEQNSEYE NGYGDKSAEV LEAYILKNDK PSKVFFSGDE ATICIKIKAN KDLNDLVVGF LIKDKFSQDI FGTNSNIINH PIAVKKDKIY LISYILNLNI GNAFYTMSLA LHQSNTHIDI CHHWLDNYLS FQVISDPTFI GISKLYPTIQ IKEI
|
| |