Gene CFF8240_0058 details

Gene Information

• Locus tag: CFF8240_0058
• Symbol: rpsD
• ID: 4539269
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter fetus subsp. fetus 82-40
• Kingdom: Bacteria
• Replicon accession: NC_008599
• Strand: +
• Start bp: 45574
• End bp: 46200
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 639745456
• Product: 30S ribosomal protein S4
• Protein accession: YP_891268
• Protein GI: 118474712
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAGAT ATAGAGGACC AGTTGAAAAA TTAGAAAGAC GCCTAGGTGT ATCTCTTGCA 
CTAAAAGGTG AAAGAAGACT AGCTGGTAAA AGCGCGTTAG ATAAAAGACC ATACGCACCC 
GGTCAACACG GACAAAGAAA AACAAAAATT AGCGAATATG GTTTACAATT AAGAGAAAAA 
CAAAAAGCTA AATTTATGTA CGGCGTTAGC GAAAAACAAT TCAGAAGATT GTTTTCTGAA 
GCTGCTAGAA GAGAGGGCAA CACCGGAGCT CTTCTTATAG GTCTTTTAGA GCAAAGACTT 
GATAACGTAG TTTATAGAAT GGGATTTGCT ACAACTAGAA GATTCGCAAG ACAACTTGTA 
ACTCACGGAC ATATTTTAGT AAATGGTAAA AAGGTTGATA TCCCTTCATA TAGAGTTACT 
GCCGGAGAGA AAATCGAAGT CGCAGAAAAA AGTAAAACTA ATCCACAGAT TGTAAGAGCA 
ATAGAACTTA CAAATCAAAC TGGTATAGTT GCTTGGGTTG ATGTAGAAAA AGATAAAAAA 
TATGGAATTT TCACAAGGAT TCCAGAACGT GAAGAAGTGG TCATTCCAGT TGAGGAAAGA 
TATATAGTAG AGCTTTACTC AAAATAG 

 

Protein sequence

MARYRGPVEK LERRLGVSLA LKGERRLAGK SALDKRPYAP GQHGQRKTKI SEYGLQLREK 
QKAKFMYGVS EKQFRRLFSE AARREGNTGA LLIGLLEQRL DNVVYRMGFA TTRRFARQLV 
THGHILVNGK KVDIPSYRVT AGEKIEVAEK SKTNPQIVRA IELTNQTGIV AWVDVEKDKK 
YGIFTRIPER EEVVIPVEER YIVELYSK