Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0046 |
Symbol | rplE |
ID | 4538694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | + |
Start bp | 38982 |
End bp | 39524 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639745444 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_891256 |
Protein GI | 118474581 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.772489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTAA AAGCAAAATA TAATGAGAGC ATTAAACCGG CTCTAACAAA AGAGTTTGAT ATAAAAAACC CTATGCTTAT CCCGGCAATT GAGAAAATTG TTATCAGCGT TGGAGCAGGC GAGGGCGCAA AAGATCAAAA ATTACTTCAA AATATGGCTG ATACGATATC TTTGATAGCT GGTCAAAAAG CAGTTGTAAC AAACGCTAAA AAATCAGTAG CTGGATTTAA GGTTCGCGAG GGCTATCCTG TAGGTATCAA AGTCACTCTA AGAAAAGAGC AAATGTATAC ATTTTTAGAT AAACTTGTAA GCGTTGCTTT ACCAAGAGTT AAAGACTTCC GTGGTCTTCC AAGAGATGGA TTTGATGGTC GTGGAAACTA CAATTTTGGT TTAAATGAAC AATTAATGTT CCCAGAAGTA GTATATGATC AAATTTTAAG AACACATGGT ATGAATATAA CTATAGTTAC AACAGCGGGT GATGACAAAC AAGCATTCAA ATTACTTGAA TTGTTCGGCA TTCCATTTGC AAAAGGAAAG TAA
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Protein sequence | MRLKAKYNES IKPALTKEFD IKNPMLIPAI EKIVISVGAG EGAKDQKLLQ NMADTISLIA GQKAVVTNAK KSVAGFKVRE GYPVGIKVTL RKEQMYTFLD KLVSVALPRV KDFRGLPRDG FDGRGNYNFG LNEQLMFPEV VYDQILRTHG MNITIVTTAG DDKQAFKLLE LFGIPFAKGK
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