Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0004 |
Symbol | |
ID | 4538617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | + |
Start bp | 4849 |
End bp | 6231 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 23% |
IMG OID | 639745402 |
Product | diguanylate cyclase/phosphodiesterase, putative |
Protein accession | YP_891214 |
Protein GI | 118475336 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTATA GCCAGCAAAA AGAGCGAAGT AACCGCTTTG CTCTTGCTCT TAGGATAGCT ACTCCTTTTA TCATTATTTT ATTTATTTGG GGTTATGCGT TTGTAAATTT AAAAAACTAT AAAATTTATG AAATAATTCT ATTTGCTCTG CTCACATTTA TATATGTTTA TTATACTTTT TATATGATTT ATAATGGATT TAATATAAGT CTTATTGATC AATCTACGGG AAGTTTTACA AGAGATAAAA TTATAAAAAT TATAAATAAA AGCATTAAAA ACGGTGAAAA AAAGTATATC ATTATGATAT CTATAAAAAA TTTAAATGAA ATTGCTAATA AATACGGGCT TGGAAGTGTT GATAAAGTTT CAAAACAATT TTTAGAAAAA CTCCATAGTT TTTTGGAAAA AAATAGTATT CGCAAAGTTC CTATCGGTAA ATATATTGAT GGATGTTTTA TTTTGCTTAT CGACTCTAAA TTTAGTAAAT TTAATAACTT ATTAAAAAGC TTTGAGCTTA GTATTTTAAG AGATAATATC GATAATATAG AGCTTAATTT AGCTTACAAT AATATTAGAT CTGATTATGA TTTAAATTTG AATGTCACTC TTTCAACTCT ATTTTATATG ATTTTAGATA GACAAAATGA GCTAAAAATA AACGAAAGCA AATATGAAAA GATGATTTTT GAAGCACTGC GCGATAAAAA TTTTATTTTT AAATTTCAAA CTATAAAAAG TAATAAAAAC TCAGATGATA TGACATATGT GATGCAAAGA CTAAAACTTC CGAACTCAAA TATATCAAAA ATCAAATTTT CCCAAGTTAT AAACAGAATC GGTTATGAGA TATTTTATGA TAAAGAGGTT TTAAGGCTGT TTTTTAGTAG AATTAGCAAA GATATAAAAG GTAAAATTTT CATAGAAATT TCTCCTGTTA GTCTAAGAAA CTACTTTTTT AAAGCAGAGC TTTTTAAAAT GATAAAAAAG TATAATATAA ATGCTAAAAA TTTAGTTTTT GAGTTTTTTG AGGATAAATT TTATGATGAA ATTTCAAATT TTAACAATAT TATAAATGAG TATAAAAAAT TTGGATTTAG CTTTGCTTTG AGCCATTTTG GTGGAAAAAA TAGTAGCTTT GAGTATCTTA AATATTTAAA TATTGATTAT ATAATTTATG ATATTGAATT TAGTAAAAAT CTACATAAAG ATAGATTTAA AATGTTATTT AATAGTGTAA ATAGCGCTTC AAAAGCTCTT GATATAAAAA CAATTATTAG ATTTATAAGT AGTAATGAGC TTTATGAAAT AGCAAAAAAT AGTGAAGTTG ATTATATCCA AGGTTTTTAC ATTGAAAAAC CTAAGTTAAA TTTAAAGGAT TAA
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Protein sequence | MLYSQQKERS NRFALALRIA TPFIIILFIW GYAFVNLKNY KIYEIILFAL LTFIYVYYTF YMIYNGFNIS LIDQSTGSFT RDKIIKIINK SIKNGEKKYI IMISIKNLNE IANKYGLGSV DKVSKQFLEK LHSFLEKNSI RKVPIGKYID GCFILLIDSK FSKFNNLLKS FELSILRDNI DNIELNLAYN NIRSDYDLNL NVTLSTLFYM ILDRQNELKI NESKYEKMIF EALRDKNFIF KFQTIKSNKN SDDMTYVMQR LKLPNSNISK IKFSQVINRI GYEIFYDKEV LRLFFSRISK DIKGKIFIEI SPVSLRNYFF KAELFKMIKK YNINAKNLVF EFFEDKFYDE ISNFNNIINE YKKFGFSFAL SHFGGKNSSF EYLKYLNIDY IIYDIEFSKN LHKDRFKMLF NSVNSASKAL DIKTIIRFIS SNELYEIAKN SEVDYIQGFY IEKPKLNLKD
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