Gene Acel_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_2105 
Symbol 
ID4484958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2382228 
End bp2383184 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content67% 
IMG OID639730906 
Productprephenate dehydratase 
Protein accessionYP_873863 
Protein GI117929312 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.547731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG TTCCGAGGTA CGCCTATTTG GGGCCGGAAG GCACCTTCAG CGAAGCGGCG 
TTGCGCTCAC TGCCCGAAAC AGCCGGCGCG ATTCTCCTGC CCTATCGCAG CGTGGCGACC
GCCCTTGATG CGGTGCGTCG AGGTGAGGTG AGCGCAGCGC TGGTTCCGGT CGAGAACTCC
GTCGGGGGCG GAGTGGACAG CACGATTGAC GAATTGTCCT CCGGCGAGCT TCTCCATATT
TGCCGCGAGG TGCTGCTCGA CGTCGGATTC GCCTTCGCCG TTCCTCCGGG TGCGACGCGC
GAGCAGGTAC GCCGGGTTGC CGCGCACCCG CAGGCGGAGG CCCAGTGCCG GCGGTGGATC
GCGGAGAACC TCCCGGAGGC CGAGGTCGTT CCGGCCGGCT CTAATGCTGA CGCCGCAGCA
ATGGCGGCCT CCGGCACGGA AAATCTCGAC GCGGCCATTA CCTCGGCGCT TGCGGCGGAA
CGGTACGGCC TGAAAATCCT GGACGATGAC ATTCACGACC ACGGCCACGC CGTGACCCGA
TTTCTCCTCC TCCGTCGGCC CGGGCCGCCG ATGCCGCGGA CCGGAGCGGA CAAGACGTCG
CTCGTCGCGT GGATCGGTGA GGACCACCCG GGCGCATTGC TCGAGGTGCT GACCGAATTC
GCCGTCCGCG GCATCAACCT CACGTGGATC GAATCCCGAC CCGCCGGCGG CAAGCTCGGC
CGGTACTGCT TCTCTATCGA CTGTGAAGGT CACATCGCGG ACGCCCGGGT GGGCGAAGCT
CTGATGGGAT TGCGTCGAAT CTGCGCCGCG GTCCGGTTCC TCGGCAGTTA TCCACGAGCC
GACGGTGCCG AACCGACAAC CCGGCGCGGT ACCTCGGACG CCGACTTTGC TGAGGCGGCT
GAATGGTTGC GCCGGCTCCG CGCCGGCATC GTCGACGAGG AGCCGACCGA GCCGTGA
 
Protein sequence
MADVPRYAYL GPEGTFSEAA LRSLPETAGA ILLPYRSVAT ALDAVRRGEV SAALVPVENS 
VGGGVDSTID ELSSGELLHI CREVLLDVGF AFAVPPGATR EQVRRVAAHP QAEAQCRRWI
AENLPEAEVV PAGSNADAAA MAASGTENLD AAITSALAAE RYGLKILDDD IHDHGHAVTR
FLLLRRPGPP MPRTGADKTS LVAWIGEDHP GALLEVLTEF AVRGINLTWI ESRPAGGKLG
RYCFSIDCEG HIADARVGEA LMGLRRICAA VRFLGSYPRA DGAEPTTRRG TSDADFAEAA
EWLRRLRAGI VDEEPTEP