Gene Acel_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1976 
Symbol 
ID4485104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2251041 
End bp2253557 
Gene Length2517 bp 
Protein Length838 aa 
Translation table11 
GC content68% 
IMG OID639730769 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_873734 
Protein GI117929183 
COG category[R] General function prediction only 
COG ID[COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTGC CTGCCGCGGT GGTACGCAGC GCGAAGGAGT CCGAGCCCGG CGAATCCGGC 
GCCGTTCTCA CGGCAGGTGA GCGCGACCAT CCCGATGTCG CGGCGCTCTT CGCCGGACGC
TCGGTCCACG TCACCGGAGT CGCGACTCTT GCGCCGCGGG CAGAGCGCGC CGAACCGTGG
CCATCGTGGG TGCCGGCGTC CGTGGTCAAT GCCTTGCAGG CCACCGGAAT TCACCAGCCG
TGGCGTCATC AAGTCGAGAC AGCGGACCTT GCCTACCGCG GACAGCACGT GATCGTGACG
ACCGGGACGG CGTCGGGCAA GTCGCTCGCC TGCCTTCTTC CCGGCTTGGC GGCGATCGCT
GCAGCGGAGG CGCAAGGCCG CGGCCAGCGG CGGACGCCGA CCGTGCTGTA TCTCAGTCCA
ACCAAGGCAC TCGCAGCGGA CCAGCTGACC CGGATTCGAG CGTGGGCGGT CCCGGGCGTC
TGTGCGGCGA TCTATGACGG AGACAGTTCG CCGGCGGACC GGTCCTGGGC CCGCCGGTAC
GCGAACGTCG TCTTGACCAA TCCCGACATG GTGCACTACG GGCTGCTGCC GGGTCATCGA
CGGTGGACGT CGCTCTGGCG TGGACTCCGC TACGTCGTCG TCGATGAATG CCACTGTTAC
CGGGGAATTT TTGGCGCCCA GGTCGCCGCC GTGCTCCGCC GATTGCGGCG GATTTGCCGA
CACTACGGCG CCGATCCCGT CTTCGTTTGC GCATCGGCGA CGGTCGCCGA GCCGGACCGT
GCGGCCCGGC TGCTCACCGG CGTACCGGCC CGGGTGGTAC ACGGTGACGC GGCTCCGCGC
GCACCGCTTC GCTTCGCCTT CGTTGAACCA ACGGGTGGAT CGGCGGTGGC CGAGGCCGCA
TACGCTGTGG CGCAGCTGGT AGCCCGCGGT CAACGGGTCA TCGCGTACAT CAATTCGCGC
CGGGGGACCG AGATTCTCGC GGCCGCAGCC CGGCGCCACC TGGAGACGAT CAGACCCTCG
GCTGTGCACG CTGTCGCGGC ATATCGGGGC GGCTATCTCC CCGACGAGCG CCGCCGGCTG
GAGGCTGAGC TGCGTTCGGG ACGATTGCGG GGACTCGCGG CGACGTCCGC ACTGGAGTTG
GGCGTTGATG TCGCCGGGGT TGACGCGGTA GTGCTGGTCG GCTTCCCCGG GACGCGTGCG
TCGTTATGGC AGCAGGTCGG CCGCGCGGGA CGCCGGAACT CCCCGGCACT CGCCGTGTTC
ATTGCCCGGG ATGACCCACT GGATCGCTAC CTCGTCCGGC GTCCCGAGAC ACTGCTGGAC
GGAGGGGTTG AGGCATTTGT CTTCGATCCA GGGAATCGCT ATGTGCTCGC GCCGCAGGTA
TGCGCAGCCG CAGCTGAATT GCCGTTGACA TCGGAGGATG TCGAGGTGTT CTCGGCACCT
CCAGGCGGTG CTGTATTTTC GGCACCCCCT GGCACGTCGG TGTCTTCGCG CGGGTCGGCA
CCTCACGCAC CTCCCCCCGG TCCGGCGATT CCCGGCACAT CGGTATCCGC GGGCGGTCCG
GCGATTCCCA GCGCATCGGT ATCCGCGGCC GGGTCAGCAC CTACTGACGA TGCCGCCGCA
CTATTCGACG ACCTGACACG CCGGGGGCTG CTTCGCCGCC GTCGGGACGG CTGGCACTGG
GTGAGGCGCG AGTCGCCGAC GGCGTCGATC GATTTGCGGG GCGCGGGCGG TGGGACGGTC
GACATTGTCG AGCTCCCGAC CGGTCAGCTG CTCGGAACCG CAACCGACGT GCACGCCGAT
GTCACCTTGC ACCCCGGGGC GGTGTATGTG CATCAGGGAC AGAGTTTTCT CGTGGAGAGC
TACGATGCCG AGGCGCGTGC TGTGCTGGTG CGGGCGGCGG ACGTCGACTA TGTGACCATC
GCAGAGGAAG TGACCGACAT TCGCGTCGTT GAAACCGTGG CGACCACAAT GCGGGACACG
GCGACGGTCT GTTTTGGCCA GGTGGCCGTG CTGCGGCAGG TCGTCGGCTT CGCCCGTAAG
CGACTGCTCA CCGGAGAGTT TCTGGATCGA TTTCCGCTGG AACCGCGCAC GCAGCGGTTG
GCCACGAAGG CGGTGTGGTG GACCGTTGAG GAGGACGCGC TGCGTCGCGC CGCCCTGACA
CCGGAGCGGT ATCCGGGAGC CGCGCACGCA GCGGAGCACT CAGCAATCGG CCTCCTGCCG
CTCTTCGCGA CCTGCGATCG ATGGGACATC GGGGGCGTGT CCACCGCCTG GCATCCGGAC
ACCGGCCGGC TTACCGTATT CGTCTACGAC GGTTATCCCG GCGGGGCGGG AATTGCTGAG
CGCGGCTATA CAGCGTACCG ACAGTGGCTT CACGCGACCC GAGACGCCAT CGCCCGATGC
GCATGCGACC ACGGCTGTCC GTCGTGCATT CAGTCACCAA AGTGCGGAAA CGGGAACGAG
CCGCTGGATA AGGCCGGGGC AATTGAGCTC CTCGACGTCG TATTAGCAGG CGGATAG
 
Protein sequence
MKVPAAVVRS AKESEPGESG AVLTAGERDH PDVAALFAGR SVHVTGVATL APRAERAEPW 
PSWVPASVVN ALQATGIHQP WRHQVETADL AYRGQHVIVT TGTASGKSLA CLLPGLAAIA
AAEAQGRGQR RTPTVLYLSP TKALAADQLT RIRAWAVPGV CAAIYDGDSS PADRSWARRY
ANVVLTNPDM VHYGLLPGHR RWTSLWRGLR YVVVDECHCY RGIFGAQVAA VLRRLRRICR
HYGADPVFVC ASATVAEPDR AARLLTGVPA RVVHGDAAPR APLRFAFVEP TGGSAVAEAA
YAVAQLVARG QRVIAYINSR RGTEILAAAA RRHLETIRPS AVHAVAAYRG GYLPDERRRL
EAELRSGRLR GLAATSALEL GVDVAGVDAV VLVGFPGTRA SLWQQVGRAG RRNSPALAVF
IARDDPLDRY LVRRPETLLD GGVEAFVFDP GNRYVLAPQV CAAAAELPLT SEDVEVFSAP
PGGAVFSAPP GTSVSSRGSA PHAPPPGPAI PGTSVSAGGP AIPSASVSAA GSAPTDDAAA
LFDDLTRRGL LRRRRDGWHW VRRESPTASI DLRGAGGGTV DIVELPTGQL LGTATDVHAD
VTLHPGAVYV HQGQSFLVES YDAEARAVLV RAADVDYVTI AEEVTDIRVV ETVATTMRDT
ATVCFGQVAV LRQVVGFARK RLLTGEFLDR FPLEPRTQRL ATKAVWWTVE EDALRRAALT
PERYPGAAHA AEHSAIGLLP LFATCDRWDI GGVSTAWHPD TGRLTVFVYD GYPGGAGIAE
RGYTAYRQWL HATRDAIARC ACDHGCPSCI QSPKCGNGNE PLDKAGAIEL LDVVLAGG