Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1964 |
Symbol | |
ID | 4485092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 2230713 |
End bp | 2231546 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639730757 |
Product | PSP1 domain-containing protein |
Protein accession | YP_873722 |
Protein GI | 117929171 |
COG category | [S] Function unknown |
COG ID | [COG1774] Uncharacterized homolog of PSP1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.71417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGATGG CCGTCAGCTT CAACCGATAC GGGAGGCTGT ATTACCTTGA CCCCGGGCCG TACGCCCCGA AGGTCGGCGA CAAGGTGCTG TACCCGACAA CGGCGGGCAA CGAGGTTGCC GAGTGCGTCT GGCCCCCGAC GTACGTGTCC GAGGAGATCG AGGGTCTGCC GGTCTGCGCC GGGTTTGCCA CGGACGCCGA TCTTGCCCGT GACGAGCGGA ACCGCGGGCG ACGGGCGCAC GCCCGGGTGG TCGCCCGCCG GTTGATCCGC GAACACAGCC TGCCGATGAA GCTGGTCGGG GTTGATTTTC TGGACGCCGA CAATACGTTC CTGTTCTATT TCAGCGCGCC GCACCGGGTG GATTTCCGGG CGTTGGTCCG CGCTCTCTCG GCGGAATTGG ACGCACGTGT GGAGCTGCGG CAATTGCGCG CCCGCGACGA GGCTCGTGTG CAGACGGCGA TCGGCCCATG CGGCCGGGAC ACGTGTTGCT CGACTTTTCT CAAGGACTTT GAGCCGGTCT CGGTCCGCAT GGCACGCGAC CAGGATTTGC CGGCGAATCC GCTGCGGATT TCCGGTGCCT GCGGACGGCT CATGTGCTGC CTGAAATACG AGCATCCGTT GTACGCCGAA TTCAAGGCGG ATCTCCCGCG GATCGGGAGC CGGGTCTCCA CACCGGACGG CGACGGGGTG CTCGTCGGCT ACAACGTCCC GGCCGGAAAC GTGGTCGTGA AGCTCACCGC GACTGGAGAA CGGTGCGTGT GTCCGAAGGC GAGCGTGTGC GGTTCGCGCC GCAGCTACGA GGAGCGGTAC GGCCGCCGCG AGCCGCAGGA GTGA
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Protein sequence | MMMAVSFNRY GRLYYLDPGP YAPKVGDKVL YPTTAGNEVA ECVWPPTYVS EEIEGLPVCA GFATDADLAR DERNRGRRAH ARVVARRLIR EHSLPMKLVG VDFLDADNTF LFYFSAPHRV DFRALVRALS AELDARVELR QLRARDEARV QTAIGPCGRD TCCSTFLKDF EPVSVRMARD QDLPANPLRI SGACGRLMCC LKYEHPLYAE FKADLPRIGS RVSTPDGDGV LVGYNVPAGN VVVKLTATGE RCVCPKASVC GSRRSYEERY GRREPQE
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